Gene : Thhalv10011060m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10535:SF5 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5C Genomic Order:  142
Name:  ? Thhalv10011060m.g Secondary Identifier:  ? PAC:20207061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011060m.g 0.5kb upstream 0.5kb upstream 2113 true scaffold_16: 672124-674236 Eutrema salsugineum
Thhalv10011060m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 673737-674236 Eutrema salsugineum
Thhalv10011060m.g 0.5kb downstream 0.5kb downstream 2113 true scaffold_16: 671624-673736 Eutrema salsugineum
Thhalv10011060m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 671624-672123 Eutrema salsugineum
Thhalv10011060m.g 1.0kb upstream 1.0kb upstream 2613 true scaffold_16: 672124-674736 Eutrema salsugineum
Thhalv10011060m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 673737-674736 Eutrema salsugineum
Thhalv10011060m.g 1.0kb downstream 1.0kb downstream 2613 true scaffold_16: 671124-673736 Eutrema salsugineum
Thhalv10011060m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 671124-672123 Eutrema salsugineum
Thhalv10011060m.g 2.0kb upstream 2.0kb upstream 3613 true scaffold_16: 672124-675736 Eutrema salsugineum
Thhalv10011060m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 673737-675736 Eutrema salsugineum
Thhalv10011060m.g 2.0kb downstream 2.0kb downstream 3613 true scaffold_16: 670124-673736 Eutrema salsugineum
Thhalv10011060m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 670124-672123 Eutrema salsugineum
Thhalv10011060m.g 5.0kb upstream 5.0kb upstream 6613 true scaffold_16: 672124-678736 Eutrema salsugineum
Thhalv10011060m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 673737-678736 Eutrema salsugineum
Thhalv10011060m.g 5.0kb downstream 5.0kb downstream 6613 true scaffold_16: 667124-673736 Eutrema salsugineum
Thhalv10011060m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 667124-672123 Eutrema salsugineum
Thhalv10011060m.g 10.0kb upstream 10.0kb upstream 11613 true scaffold_16: 672124-683736 Eutrema salsugineum
Thhalv10011060m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 673737-683736 Eutrema salsugineum
Thhalv10011060m.g 10.0kb downstream 10.0kb downstream 11613 true scaffold_16: 662124-673736 Eutrema salsugineum
Thhalv10011060m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 662124-672123 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366690 5261 Brassicaceae View MSA
123831164 5264 Brassicales-Malvales View MSA
124337139 5266 SBM View MSA
124244665 5268 Malvidae View MSA
124060550 5270 Rosid View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain