Gene : Thhalv10011085m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  621
Name:  ? Thhalv10011085m.g Secondary Identifier:  ? PAC:20206839
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ETHYL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-7270 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011085m.g 0.5kb upstream 0.5kb upstream 2182 true scaffold_16: 2849400-2851581 Eutrema salsugineum
Thhalv10011085m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 2849400-2849899 Eutrema salsugineum
Thhalv10011085m.g 0.5kb downstream 0.5kb downstream 2182 true scaffold_16: 2849900-2852081 Eutrema salsugineum
Thhalv10011085m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 2851582-2852081 Eutrema salsugineum
Thhalv10011085m.g 1.0kb upstream 1.0kb upstream 2682 true scaffold_16: 2848900-2851581 Eutrema salsugineum
Thhalv10011085m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 2848900-2849899 Eutrema salsugineum
Thhalv10011085m.g 1.0kb downstream 1.0kb downstream 2682 true scaffold_16: 2849900-2852581 Eutrema salsugineum
Thhalv10011085m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 2851582-2852581 Eutrema salsugineum
Thhalv10011085m.g 2.0kb upstream 2.0kb upstream 3682 true scaffold_16: 2847900-2851581 Eutrema salsugineum
Thhalv10011085m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 2847900-2849899 Eutrema salsugineum
Thhalv10011085m.g 2.0kb downstream 2.0kb downstream 3682 true scaffold_16: 2849900-2853581 Eutrema salsugineum
Thhalv10011085m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 2851582-2853581 Eutrema salsugineum
Thhalv10011085m.g 5.0kb upstream 5.0kb upstream 6682 true scaffold_16: 2844900-2851581 Eutrema salsugineum
Thhalv10011085m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 2844900-2849899 Eutrema salsugineum
Thhalv10011085m.g 5.0kb downstream 5.0kb downstream 6682 true scaffold_16: 2849900-2856581 Eutrema salsugineum
Thhalv10011085m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 2851582-2856581 Eutrema salsugineum
Thhalv10011085m.g 10.0kb upstream 10.0kb upstream 11682 true scaffold_16: 2839900-2851581 Eutrema salsugineum
Thhalv10011085m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 2839900-2849899 Eutrema salsugineum
Thhalv10011085m.g 10.0kb downstream 10.0kb downstream 11682 true scaffold_16: 2849900-2861581 Eutrema salsugineum
Thhalv10011085m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 2851582-2861581 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362882 5261 Brassicaceae View MSA
123798444 5264 Brassicales-Malvales View MSA
124296078 5266 SBM View MSA
124247956 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain