Gene : Thhalv10005853m.g E. salsugineum v1.0
Defline:  (1 of 1) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  439
Name:  ? Thhalv10005853m.g Secondary Identifier:  ? PAC:20190424
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum BRANCHED-CHAIN-AA-SYN-PWY Eutrema salsugineum pathologic  
Esalsugineum ILEUSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  
Esalsugineum VALSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005853m.g 0.5kb upstream 0.5kb upstream 3945 true scaffold_19: 1717405-1721349 Eutrema salsugineum
Thhalv10005853m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 1720850-1721349 Eutrema salsugineum
Thhalv10005853m.g 0.5kb downstream 0.5kb downstream 3945 true scaffold_19: 1716905-1720849 Eutrema salsugineum
Thhalv10005853m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 1716905-1717404 Eutrema salsugineum
Thhalv10005853m.g 1.0kb upstream 1.0kb upstream 4445 true scaffold_19: 1717405-1721849 Eutrema salsugineum
Thhalv10005853m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 1720850-1721849 Eutrema salsugineum
Thhalv10005853m.g 1.0kb downstream 1.0kb downstream 4445 true scaffold_19: 1716405-1720849 Eutrema salsugineum
Thhalv10005853m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 1716405-1717404 Eutrema salsugineum
Thhalv10005853m.g 2.0kb upstream 2.0kb upstream 5445 true scaffold_19: 1717405-1722849 Eutrema salsugineum
Thhalv10005853m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 1720850-1722849 Eutrema salsugineum
Thhalv10005853m.g 2.0kb downstream 2.0kb downstream 5445 true scaffold_19: 1715405-1720849 Eutrema salsugineum
Thhalv10005853m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 1715405-1717404 Eutrema salsugineum
Thhalv10005853m.g 5.0kb upstream 5.0kb upstream 8445 true scaffold_19: 1717405-1725849 Eutrema salsugineum
Thhalv10005853m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 1720850-1725849 Eutrema salsugineum
Thhalv10005853m.g 5.0kb downstream 5.0kb downstream 8445 true scaffold_19: 1712405-1720849 Eutrema salsugineum
Thhalv10005853m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 1712405-1717404 Eutrema salsugineum
Thhalv10005853m.g 10.0kb upstream 10.0kb upstream 13445 true scaffold_19: 1717405-1730849 Eutrema salsugineum
Thhalv10005853m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 1720850-1730849 Eutrema salsugineum
Thhalv10005853m.g 10.0kb downstream 10.0kb downstream 13445 true scaffold_19: 1707405-1720849 Eutrema salsugineum
Thhalv10005853m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 1707405-1717404 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368423 5261 Brassicaceae View MSA
123828492 5264 Brassicales-Malvales View MSA
124339638 5266 SBM View MSA
124249053 5268 Malvidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain