Gene : Thhalv10005873m.g E. salsugineum v1.0
Defline:  (1 of 1) PF03088//PF08450 - Strictosidine synthase (Str_synth) // SMP-30/Gluconolaconase/LRE-like region (SGL) Genomic Order:  578
Name:  ? Thhalv10005873m.g Secondary Identifier:  ? PAC:20190812
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005873m.g 0.5kb upstream 0.5kb upstream 2910 true scaffold_19: 2344225-2347134 Eutrema salsugineum
Thhalv10005873m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 2344225-2344724 Eutrema salsugineum
Thhalv10005873m.g 0.5kb downstream 0.5kb downstream 2910 true scaffold_19: 2344725-2347634 Eutrema salsugineum
Thhalv10005873m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 2347135-2347634 Eutrema salsugineum
Thhalv10005873m.g 1.0kb upstream 1.0kb upstream 3410 true scaffold_19: 2343725-2347134 Eutrema salsugineum
Thhalv10005873m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 2343725-2344724 Eutrema salsugineum
Thhalv10005873m.g 1.0kb downstream 1.0kb downstream 3410 true scaffold_19: 2344725-2348134 Eutrema salsugineum
Thhalv10005873m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 2347135-2348134 Eutrema salsugineum
Thhalv10005873m.g 2.0kb upstream 2.0kb upstream 4410 true scaffold_19: 2342725-2347134 Eutrema salsugineum
Thhalv10005873m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 2342725-2344724 Eutrema salsugineum
Thhalv10005873m.g 2.0kb downstream 2.0kb downstream 4410 true scaffold_19: 2344725-2349134 Eutrema salsugineum
Thhalv10005873m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 2347135-2349134 Eutrema salsugineum
Thhalv10005873m.g 5.0kb upstream 5.0kb upstream 7410 true scaffold_19: 2339725-2347134 Eutrema salsugineum
Thhalv10005873m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 2339725-2344724 Eutrema salsugineum
Thhalv10005873m.g 5.0kb downstream 5.0kb downstream 7410 true scaffold_19: 2344725-2352134 Eutrema salsugineum
Thhalv10005873m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 2347135-2352134 Eutrema salsugineum
Thhalv10005873m.g 10.0kb upstream 10.0kb upstream 12410 true scaffold_19: 2334725-2347134 Eutrema salsugineum
Thhalv10005873m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 2334725-2344724 Eutrema salsugineum
Thhalv10005873m.g 10.0kb downstream 10.0kb downstream 12410 true scaffold_19: 2344725-2357134 Eutrema salsugineum
Thhalv10005873m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 2347135-2357134 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357746 5261 Brassicaceae Singleton cluster - no MSA
123795767 5264 Brassicales-Malvales Singleton cluster - no MSA
124293549 5266 SBM Singleton cluster - no MSA
124146185 5268 Malvidae Singleton cluster - no MSA
124072949 5270 Rosid View MSA
123746147 5271 Pentapetalae View MSA
122796152 5272 Eudicot View MSA
122047810 5273 Angiosperm View MSA
121350347 5274 Embryophyte View MSA
123427583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain