Gene : Thhalv10005906m.g E. salsugineum v1.0
Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  424
Name:  ? Thhalv10005906m.g Secondary Identifier:  ? PAC:20190407
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLYOXYLATE-BYPASS Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005906m.g 0.5kb upstream 0.5kb upstream 4003 true scaffold_19: 1658335-1662337 Eutrema salsugineum
Thhalv10005906m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 1658335-1658834 Eutrema salsugineum
Thhalv10005906m.g 0.5kb downstream 0.5kb downstream 4003 true scaffold_19: 1658835-1662837 Eutrema salsugineum
Thhalv10005906m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 1662338-1662837 Eutrema salsugineum
Thhalv10005906m.g 1.0kb upstream 1.0kb upstream 4503 true scaffold_19: 1657835-1662337 Eutrema salsugineum
Thhalv10005906m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 1657835-1658834 Eutrema salsugineum
Thhalv10005906m.g 1.0kb downstream 1.0kb downstream 4503 true scaffold_19: 1658835-1663337 Eutrema salsugineum
Thhalv10005906m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 1662338-1663337 Eutrema salsugineum
Thhalv10005906m.g 2.0kb upstream 2.0kb upstream 5503 true scaffold_19: 1656835-1662337 Eutrema salsugineum
Thhalv10005906m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 1656835-1658834 Eutrema salsugineum
Thhalv10005906m.g 2.0kb downstream 2.0kb downstream 5503 true scaffold_19: 1658835-1664337 Eutrema salsugineum
Thhalv10005906m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 1662338-1664337 Eutrema salsugineum
Thhalv10005906m.g 5.0kb upstream 5.0kb upstream 8503 true scaffold_19: 1653835-1662337 Eutrema salsugineum
Thhalv10005906m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 1653835-1658834 Eutrema salsugineum
Thhalv10005906m.g 5.0kb downstream 5.0kb downstream 8503 true scaffold_19: 1658835-1667337 Eutrema salsugineum
Thhalv10005906m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 1662338-1667337 Eutrema salsugineum
Thhalv10005906m.g 10.0kb upstream 10.0kb upstream 13503 true scaffold_19: 1648835-1662337 Eutrema salsugineum
Thhalv10005906m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 1648835-1658834 Eutrema salsugineum
Thhalv10005906m.g 10.0kb downstream 10.0kb downstream 13503 true scaffold_19: 1658835-1672337 Eutrema salsugineum
Thhalv10005906m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 1662338-1672337 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373975 5261 Brassicaceae View MSA
123836656 5264 Brassicales-Malvales View MSA
124345629 5266 SBM View MSA
124251480 5268 Malvidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain