Gene : Thhalv10005881m.g E. salsugineum v1.0
Defline:  (1 of 4) 6.1.1.16 - Cysteine--tRNA ligase / Cysteinyl-tRNA synthetase Genomic Order:  565
Name:  ? Thhalv10005881m.g Secondary Identifier:  ? PAC:20190498
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005881m.g 0.5kb upstream 0.5kb upstream 2928 true scaffold_19: 2297612-2300539 Eutrema salsugineum
Thhalv10005881m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 2300040-2300539 Eutrema salsugineum
Thhalv10005881m.g 0.5kb downstream 0.5kb downstream 2928 true scaffold_19: 2297112-2300039 Eutrema salsugineum
Thhalv10005881m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 2297112-2297611 Eutrema salsugineum
Thhalv10005881m.g 1.0kb upstream 1.0kb upstream 3428 true scaffold_19: 2297612-2301039 Eutrema salsugineum
Thhalv10005881m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 2300040-2301039 Eutrema salsugineum
Thhalv10005881m.g 1.0kb downstream 1.0kb downstream 3428 true scaffold_19: 2296612-2300039 Eutrema salsugineum
Thhalv10005881m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 2296612-2297611 Eutrema salsugineum
Thhalv10005881m.g 2.0kb upstream 2.0kb upstream 4428 true scaffold_19: 2297612-2302039 Eutrema salsugineum
Thhalv10005881m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 2300040-2302039 Eutrema salsugineum
Thhalv10005881m.g 2.0kb downstream 2.0kb downstream 4428 true scaffold_19: 2295612-2300039 Eutrema salsugineum
Thhalv10005881m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 2295612-2297611 Eutrema salsugineum
Thhalv10005881m.g 5.0kb upstream 5.0kb upstream 7428 true scaffold_19: 2297612-2305039 Eutrema salsugineum
Thhalv10005881m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 2300040-2305039 Eutrema salsugineum
Thhalv10005881m.g 5.0kb downstream 5.0kb downstream 7428 true scaffold_19: 2292612-2300039 Eutrema salsugineum
Thhalv10005881m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 2292612-2297611 Eutrema salsugineum
Thhalv10005881m.g 10.0kb upstream 10.0kb upstream 12428 true scaffold_19: 2297612-2310039 Eutrema salsugineum
Thhalv10005881m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 2300040-2310039 Eutrema salsugineum
Thhalv10005881m.g 10.0kb downstream 10.0kb downstream 12428 true scaffold_19: 2287612-2300039 Eutrema salsugineum
Thhalv10005881m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 2287612-2297611 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380473 5261 Brassicaceae View MSA
123802736 5264 Brassicales-Malvales View MSA
124299904 5266 SBM View MSA
124250049 5268 Malvidae View MSA
124063129 5270 Rosid View MSA
123736819 5271 Pentapetalae View MSA
122791424 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain