Gene : Thhalv10005960m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13343:SF18 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  378
Name:  ? Thhalv10005960m.g Secondary Identifier:  ? PAC:20190114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005960m.g 0.5kb upstream 0.5kb upstream 3578 true scaffold_19: 1461855-1465432 Eutrema salsugineum
Thhalv10005960m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 1464933-1465432 Eutrema salsugineum
Thhalv10005960m.g 0.5kb downstream 0.5kb downstream 3578 true scaffold_19: 1461355-1464932 Eutrema salsugineum
Thhalv10005960m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 1461355-1461854 Eutrema salsugineum
Thhalv10005960m.g 1.0kb upstream 1.0kb upstream 4078 true scaffold_19: 1461855-1465932 Eutrema salsugineum
Thhalv10005960m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 1464933-1465932 Eutrema salsugineum
Thhalv10005960m.g 1.0kb downstream 1.0kb downstream 4078 true scaffold_19: 1460855-1464932 Eutrema salsugineum
Thhalv10005960m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 1460855-1461854 Eutrema salsugineum
Thhalv10005960m.g 2.0kb upstream 2.0kb upstream 5078 true scaffold_19: 1461855-1466932 Eutrema salsugineum
Thhalv10005960m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 1464933-1466932 Eutrema salsugineum
Thhalv10005960m.g 2.0kb downstream 2.0kb downstream 5078 true scaffold_19: 1459855-1464932 Eutrema salsugineum
Thhalv10005960m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 1459855-1461854 Eutrema salsugineum
Thhalv10005960m.g 5.0kb upstream 5.0kb upstream 8078 true scaffold_19: 1461855-1469932 Eutrema salsugineum
Thhalv10005960m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 1464933-1469932 Eutrema salsugineum
Thhalv10005960m.g 5.0kb downstream 5.0kb downstream 8078 true scaffold_19: 1456855-1464932 Eutrema salsugineum
Thhalv10005960m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 1456855-1461854 Eutrema salsugineum
Thhalv10005960m.g 10.0kb upstream 10.0kb upstream 13078 true scaffold_19: 1461855-1474932 Eutrema salsugineum
Thhalv10005960m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 1464933-1474932 Eutrema salsugineum
Thhalv10005960m.g 10.0kb downstream 10.0kb downstream 13078 true scaffold_19: 1451855-1464932 Eutrema salsugineum
Thhalv10005960m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 1451855-1461854 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362046 5261 Brassicaceae View MSA
123832420 5264 Brassicales-Malvales View MSA
124321797 5266 SBM View MSA
124247203 5268 Malvidae View MSA
124068606 5270 Rosid View MSA
123738942 5271 Pentapetalae View MSA
122769938 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain