Gene : Thhalv10005943m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  175
Name:  ? Thhalv10005943m.g Secondary Identifier:  ? PAC:20190327
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6609 Eutrema salsugineum pathologic  
Esalsugineum PWY-7179 Eutrema salsugineum pathologic  
Esalsugineum SALVADEHYPOX-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005943m.g 0.5kb upstream 0.5kb upstream 3488 true scaffold_19: 664542-668029 Eutrema salsugineum
Thhalv10005943m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 664542-665041 Eutrema salsugineum
Thhalv10005943m.g 0.5kb downstream 0.5kb downstream 3488 true scaffold_19: 665042-668529 Eutrema salsugineum
Thhalv10005943m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 668030-668529 Eutrema salsugineum
Thhalv10005943m.g 1.0kb upstream 1.0kb upstream 3988 true scaffold_19: 664042-668029 Eutrema salsugineum
Thhalv10005943m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 664042-665041 Eutrema salsugineum
Thhalv10005943m.g 1.0kb downstream 1.0kb downstream 3988 true scaffold_19: 665042-669029 Eutrema salsugineum
Thhalv10005943m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 668030-669029 Eutrema salsugineum
Thhalv10005943m.g 2.0kb upstream 2.0kb upstream 4988 true scaffold_19: 663042-668029 Eutrema salsugineum
Thhalv10005943m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 663042-665041 Eutrema salsugineum
Thhalv10005943m.g 2.0kb downstream 2.0kb downstream 4988 true scaffold_19: 665042-670029 Eutrema salsugineum
Thhalv10005943m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 668030-670029 Eutrema salsugineum
Thhalv10005943m.g 5.0kb upstream 5.0kb upstream 7988 true scaffold_19: 660042-668029 Eutrema salsugineum
Thhalv10005943m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 660042-665041 Eutrema salsugineum
Thhalv10005943m.g 5.0kb downstream 5.0kb downstream 7988 true scaffold_19: 665042-673029 Eutrema salsugineum
Thhalv10005943m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 668030-673029 Eutrema salsugineum
Thhalv10005943m.g 10.0kb upstream 10.0kb upstream 12988 true scaffold_19: 655042-668029 Eutrema salsugineum
Thhalv10005943m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 655042-665041 Eutrema salsugineum
Thhalv10005943m.g 10.0kb downstream 10.0kb downstream 12988 true scaffold_19: 665042-678029 Eutrema salsugineum
Thhalv10005943m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 668030-678029 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain