Gene : Thhalv10003398m.g E. salsugineum v1.0
Defline:  (1 of 93) KOG0417 - Ubiquitin-protein ligase Genomic Order:  209
Name:  ? Thhalv10003398m.g Secondary Identifier:  ? PAC:20208083
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003398m.g 0.5kb upstream 0.5kb upstream 1253 true scaffold_17: 3444479-3445731 Eutrema salsugineum
Thhalv10003398m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 3444479-3444978 Eutrema salsugineum
Thhalv10003398m.g 0.5kb downstream 0.5kb downstream 1253 true scaffold_17: 3444979-3446231 Eutrema salsugineum
Thhalv10003398m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 3445732-3446231 Eutrema salsugineum
Thhalv10003398m.g 1.0kb upstream 1.0kb upstream 1753 true scaffold_17: 3443979-3445731 Eutrema salsugineum
Thhalv10003398m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 3443979-3444978 Eutrema salsugineum
Thhalv10003398m.g 1.0kb downstream 1.0kb downstream 1753 true scaffold_17: 3444979-3446731 Eutrema salsugineum
Thhalv10003398m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 3445732-3446731 Eutrema salsugineum
Thhalv10003398m.g 2.0kb upstream 2.0kb upstream 2753 true scaffold_17: 3442979-3445731 Eutrema salsugineum
Thhalv10003398m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 3442979-3444978 Eutrema salsugineum
Thhalv10003398m.g 2.0kb downstream 2.0kb downstream 2753 true scaffold_17: 3444979-3447731 Eutrema salsugineum
Thhalv10003398m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 3445732-3447731 Eutrema salsugineum
Thhalv10003398m.g 5.0kb upstream 5.0kb upstream 5753 true scaffold_17: 3439979-3445731 Eutrema salsugineum
Thhalv10003398m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 3439979-3444978 Eutrema salsugineum
Thhalv10003398m.g 5.0kb downstream 5.0kb downstream 5753 true scaffold_17: 3444979-3450731 Eutrema salsugineum
Thhalv10003398m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 3445732-3450731 Eutrema salsugineum
Thhalv10003398m.g 10.0kb upstream 10.0kb upstream 10753 true scaffold_17: 3434979-3445731 Eutrema salsugineum
Thhalv10003398m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 3434979-3444978 Eutrema salsugineum
Thhalv10003398m.g 10.0kb downstream 10.0kb downstream 10753 true scaffold_17: 3444979-3455731 Eutrema salsugineum
Thhalv10003398m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 3445732-3455731 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030981 5273 Angiosperm View MSA
122382259 5261 Brassicaceae View MSA
123842039 5264 Brassicales-Malvales View MSA
124323203 5266 SBM View MSA
124255587 5268 Malvidae View MSA
124041272 5270 Rosid View MSA
123647489 5271 Pentapetalae View MSA
122798530 5272 Eudicot View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain