Gene : Thhalv10006477m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11404:SF6 - SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  646
Name:  ? Thhalv10006477m.g Secondary Identifier:  ? PAC:20190544
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum DETOX1-PWY Eutrema salsugineum pathologic  
Esalsugineum DETOX1-PWY-1 Eutrema salsugineum pathologic  
Esalsugineum PWY-6854 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10006477m.g 0.5kb upstream 0.5kb upstream 2073 true scaffold_19: 2597492-2599564 Eutrema salsugineum
Thhalv10006477m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 2597492-2597991 Eutrema salsugineum
Thhalv10006477m.g 0.5kb downstream 0.5kb downstream 2073 true scaffold_19: 2597992-2600064 Eutrema salsugineum
Thhalv10006477m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 2599565-2600064 Eutrema salsugineum
Thhalv10006477m.g 1.0kb upstream 1.0kb upstream 2573 true scaffold_19: 2596992-2599564 Eutrema salsugineum
Thhalv10006477m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 2596992-2597991 Eutrema salsugineum
Thhalv10006477m.g 1.0kb downstream 1.0kb downstream 2573 true scaffold_19: 2597992-2600564 Eutrema salsugineum
Thhalv10006477m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 2599565-2600564 Eutrema salsugineum
Thhalv10006477m.g 2.0kb upstream 2.0kb upstream 3573 true scaffold_19: 2595992-2599564 Eutrema salsugineum
Thhalv10006477m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 2595992-2597991 Eutrema salsugineum
Thhalv10006477m.g 2.0kb downstream 2.0kb downstream 3573 true scaffold_19: 2597992-2601564 Eutrema salsugineum
Thhalv10006477m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 2599565-2601564 Eutrema salsugineum
Thhalv10006477m.g 5.0kb upstream 5.0kb upstream 6573 true scaffold_19: 2592992-2599564 Eutrema salsugineum
Thhalv10006477m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 2592992-2597991 Eutrema salsugineum
Thhalv10006477m.g 5.0kb downstream 5.0kb downstream 6573 true scaffold_19: 2597992-2604564 Eutrema salsugineum
Thhalv10006477m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 2599565-2604564 Eutrema salsugineum
Thhalv10006477m.g 10.0kb upstream 10.0kb upstream 11573 true scaffold_19: 2587992-2599564 Eutrema salsugineum
Thhalv10006477m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 2587992-2597991 Eutrema salsugineum
Thhalv10006477m.g 10.0kb downstream 10.0kb downstream 11573 true scaffold_19: 2597992-2609564 Eutrema salsugineum
Thhalv10006477m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 2599565-2609564 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510302 5273 Angiosperm View MSA
122361724 5261 Brassicaceae View MSA
123798231 5264 Brassicales-Malvales View MSA
124295900 5266 SBM View MSA
124148209 5268 Malvidae View MSA
123874253 5270 Rosid View MSA
123458256 5271 Pentapetalae View MSA
122493663 5272 Eudicot View MSA
120783407 5274 Embryophyte View MSA
122825421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain