Gene : Thhalv10012538m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  1523
Name:  ? Thhalv10012538m.g Secondary Identifier:  ? PAC:20205623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1001 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012538m.g 0.5kb upstream 0.5kb upstream 5415 true scaffold_2: 5884794-5890208 Eutrema salsugineum
Thhalv10012538m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5889709-5890208 Eutrema salsugineum
Thhalv10012538m.g 0.5kb downstream 0.5kb downstream 5415 true scaffold_2: 5884294-5889708 Eutrema salsugineum
Thhalv10012538m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5884294-5884793 Eutrema salsugineum
Thhalv10012538m.g 1.0kb upstream 1.0kb upstream 5915 true scaffold_2: 5884794-5890708 Eutrema salsugineum
Thhalv10012538m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5889709-5890708 Eutrema salsugineum
Thhalv10012538m.g 1.0kb downstream 1.0kb downstream 5915 true scaffold_2: 5883794-5889708 Eutrema salsugineum
Thhalv10012538m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5883794-5884793 Eutrema salsugineum
Thhalv10012538m.g 2.0kb upstream 2.0kb upstream 6915 true scaffold_2: 5884794-5891708 Eutrema salsugineum
Thhalv10012538m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5889709-5891708 Eutrema salsugineum
Thhalv10012538m.g 2.0kb downstream 2.0kb downstream 6915 true scaffold_2: 5882794-5889708 Eutrema salsugineum
Thhalv10012538m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5882794-5884793 Eutrema salsugineum
Thhalv10012538m.g 5.0kb upstream 5.0kb upstream 9915 true scaffold_2: 5884794-5894708 Eutrema salsugineum
Thhalv10012538m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5889709-5894708 Eutrema salsugineum
Thhalv10012538m.g 5.0kb downstream 5.0kb downstream 9915 true scaffold_2: 5879794-5889708 Eutrema salsugineum
Thhalv10012538m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5879794-5884793 Eutrema salsugineum
Thhalv10012538m.g 10.0kb upstream 10.0kb upstream 14915 true scaffold_2: 5884794-5899708 Eutrema salsugineum
Thhalv10012538m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5889709-5899708 Eutrema salsugineum
Thhalv10012538m.g 10.0kb downstream 10.0kb downstream 14915 true scaffold_2: 5874794-5889708 Eutrema salsugineum
Thhalv10012538m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5874794-5884793 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369978 5261 Brassicaceae View MSA
123836299 5264 Brassicales-Malvales View MSA
124345098 5266 SBM View MSA
124251673 5268 Malvidae View MSA
124065342 5270 Rosid View MSA
123753627 5271 Pentapetalae View MSA
122788990 5272 Eudicot View MSA
122047016 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain