Gene : Thhalv10012575m.g E. salsugineum v1.0
Defline:  (1 of 3) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Genomic Order:  1978
Name:  ? Thhalv10012575m.g Secondary Identifier:  ? PAC:20205037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012575m.g 0.5kb upstream 0.5kb upstream 5475 true scaffold_2: 7760096-7765570 Eutrema salsugineum
Thhalv10012575m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7765071-7765570 Eutrema salsugineum
Thhalv10012575m.g 0.5kb downstream 0.5kb downstream 5475 true scaffold_2: 7759596-7765070 Eutrema salsugineum
Thhalv10012575m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7759596-7760095 Eutrema salsugineum
Thhalv10012575m.g 1.0kb upstream 1.0kb upstream 5975 true scaffold_2: 7760096-7766070 Eutrema salsugineum
Thhalv10012575m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7765071-7766070 Eutrema salsugineum
Thhalv10012575m.g 1.0kb downstream 1.0kb downstream 5975 true scaffold_2: 7759096-7765070 Eutrema salsugineum
Thhalv10012575m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7759096-7760095 Eutrema salsugineum
Thhalv10012575m.g 2.0kb upstream 2.0kb upstream 6975 true scaffold_2: 7760096-7767070 Eutrema salsugineum
Thhalv10012575m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7765071-7767070 Eutrema salsugineum
Thhalv10012575m.g 2.0kb downstream 2.0kb downstream 6975 true scaffold_2: 7758096-7765070 Eutrema salsugineum
Thhalv10012575m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7758096-7760095 Eutrema salsugineum
Thhalv10012575m.g 5.0kb upstream 5.0kb upstream 9975 true scaffold_2: 7760096-7770070 Eutrema salsugineum
Thhalv10012575m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7765071-7770070 Eutrema salsugineum
Thhalv10012575m.g 5.0kb downstream 5.0kb downstream 9975 true scaffold_2: 7755096-7765070 Eutrema salsugineum
Thhalv10012575m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7755096-7760095 Eutrema salsugineum
Thhalv10012575m.g 10.0kb upstream 10.0kb upstream 14975 true scaffold_2: 7760096-7775070 Eutrema salsugineum
Thhalv10012575m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7765071-7775070 Eutrema salsugineum
Thhalv10012575m.g 10.0kb downstream 10.0kb downstream 14975 true scaffold_2: 7750096-7765070 Eutrema salsugineum
Thhalv10012575m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7750096-7760095 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361504 5261 Brassicaceae View MSA
123829787 5264 Brassicales-Malvales View MSA
124345364 5266 SBM View MSA
124242500 5268 Malvidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain