Gene : Thhalv10013285m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11709:SF103 - LACCASE-16 Genomic Order:  2189
Name:  ? Thhalv10013285m.g Secondary Identifier:  ? PAC:20204500
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5466 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013285m.g 0.5kb upstream 0.5kb upstream 2814 true scaffold_2: 8684236-8687049 Eutrema salsugineum
Thhalv10013285m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8684236-8684735 Eutrema salsugineum
Thhalv10013285m.g 0.5kb downstream 0.5kb downstream 2814 true scaffold_2: 8684736-8687549 Eutrema salsugineum
Thhalv10013285m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8687050-8687549 Eutrema salsugineum
Thhalv10013285m.g 1.0kb upstream 1.0kb upstream 3314 true scaffold_2: 8683736-8687049 Eutrema salsugineum
Thhalv10013285m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8683736-8684735 Eutrema salsugineum
Thhalv10013285m.g 1.0kb downstream 1.0kb downstream 3314 true scaffold_2: 8684736-8688049 Eutrema salsugineum
Thhalv10013285m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8687050-8688049 Eutrema salsugineum
Thhalv10013285m.g 2.0kb upstream 2.0kb upstream 4314 true scaffold_2: 8682736-8687049 Eutrema salsugineum
Thhalv10013285m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8682736-8684735 Eutrema salsugineum
Thhalv10013285m.g 2.0kb downstream 2.0kb downstream 4314 true scaffold_2: 8684736-8689049 Eutrema salsugineum
Thhalv10013285m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8687050-8689049 Eutrema salsugineum
Thhalv10013285m.g 5.0kb upstream 5.0kb upstream 7314 true scaffold_2: 8679736-8687049 Eutrema salsugineum
Thhalv10013285m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8679736-8684735 Eutrema salsugineum
Thhalv10013285m.g 5.0kb downstream 5.0kb downstream 7314 true scaffold_2: 8684736-8692049 Eutrema salsugineum
Thhalv10013285m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8687050-8692049 Eutrema salsugineum
Thhalv10013285m.g 10.0kb upstream 10.0kb upstream 12314 true scaffold_2: 8674736-8687049 Eutrema salsugineum
Thhalv10013285m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8674736-8684735 Eutrema salsugineum
Thhalv10013285m.g 10.0kb downstream 10.0kb downstream 12314 true scaffold_2: 8684736-8697049 Eutrema salsugineum
Thhalv10013285m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8687050-8697049 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369383 5261 Brassicaceae View MSA
123799768 5264 Brassicales-Malvales View MSA
124297257 5266 SBM View MSA
124149196 5268 Malvidae View MSA
124069794 5270 Rosid View MSA
123752484 5271 Pentapetalae View MSA
122797198 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain