Gene : Thhalv10013308m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21327:SF7 - MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 3, CHLOROPLASTIC Genomic Order:  2099
Name:  ? Thhalv10013308m.g Secondary Identifier:  ? PAC:20205130
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum RIBOSYN2-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013308m.g 0.5kb upstream 0.5kb upstream 2978 true scaffold_2: 8323116-8326093 Eutrema salsugineum
Thhalv10013308m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8325594-8326093 Eutrema salsugineum
Thhalv10013308m.g 0.5kb downstream 0.5kb downstream 2978 true scaffold_2: 8322616-8325593 Eutrema salsugineum
Thhalv10013308m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8322616-8323115 Eutrema salsugineum
Thhalv10013308m.g 1.0kb upstream 1.0kb upstream 3478 true scaffold_2: 8323116-8326593 Eutrema salsugineum
Thhalv10013308m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8325594-8326593 Eutrema salsugineum
Thhalv10013308m.g 1.0kb downstream 1.0kb downstream 3478 true scaffold_2: 8322116-8325593 Eutrema salsugineum
Thhalv10013308m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8322116-8323115 Eutrema salsugineum
Thhalv10013308m.g 2.0kb upstream 2.0kb upstream 4478 true scaffold_2: 8323116-8327593 Eutrema salsugineum
Thhalv10013308m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8325594-8327593 Eutrema salsugineum
Thhalv10013308m.g 2.0kb downstream 2.0kb downstream 4478 true scaffold_2: 8321116-8325593 Eutrema salsugineum
Thhalv10013308m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8321116-8323115 Eutrema salsugineum
Thhalv10013308m.g 5.0kb upstream 5.0kb upstream 7478 true scaffold_2: 8323116-8330593 Eutrema salsugineum
Thhalv10013308m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8325594-8330593 Eutrema salsugineum
Thhalv10013308m.g 5.0kb downstream 5.0kb downstream 7478 true scaffold_2: 8318116-8325593 Eutrema salsugineum
Thhalv10013308m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8318116-8323115 Eutrema salsugineum
Thhalv10013308m.g 10.0kb upstream 10.0kb upstream 12478 true scaffold_2: 8323116-8335593 Eutrema salsugineum
Thhalv10013308m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8325594-8335593 Eutrema salsugineum
Thhalv10013308m.g 10.0kb downstream 10.0kb downstream 12478 true scaffold_2: 8313116-8325593 Eutrema salsugineum
Thhalv10013308m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8313116-8323115 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374066 5261 Brassicaceae View MSA
123830516 5264 Brassicales-Malvales View MSA
124342854 5266 SBM View MSA
124241994 5268 Malvidae View MSA
124062618 5270 Rosid View MSA
123745495 5271 Pentapetalae View MSA
122786383 5272 Eudicot View MSA
122046960 5273 Angiosperm View MSA
121310676 5274 Embryophyte View MSA
123348102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain