Gene : Thhalv10013357m.g E. salsugineum v1.0

Defline:  (1 of 1) PTHR31412:SF5 - ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  423
Name:  ? Thhalv10013357m.g Secondary Identifier:  ? PAC:20206386

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013357m.g 0.5kb upstream 0.5kb upstream 4661 true scaffold_2: 1675588-1680248 Eutrema salsugineum
Thhalv10013357m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1679749-1680248 Eutrema salsugineum
Thhalv10013357m.g 0.5kb downstream 0.5kb downstream 4661 true scaffold_2: 1675088-1679748 Eutrema salsugineum
Thhalv10013357m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1675088-1675587 Eutrema salsugineum
Thhalv10013357m.g 1.0kb upstream 1.0kb upstream 5161 true scaffold_2: 1675588-1680748 Eutrema salsugineum
Thhalv10013357m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1679749-1680748 Eutrema salsugineum
Thhalv10013357m.g 1.0kb downstream 1.0kb downstream 5161 true scaffold_2: 1674588-1679748 Eutrema salsugineum
Thhalv10013357m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1674588-1675587 Eutrema salsugineum
Thhalv10013357m.g 2.0kb upstream 2.0kb upstream 6161 true scaffold_2: 1675588-1681748 Eutrema salsugineum
Thhalv10013357m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1679749-1681748 Eutrema salsugineum
Thhalv10013357m.g 2.0kb downstream 2.0kb downstream 6161 true scaffold_2: 1673588-1679748 Eutrema salsugineum
Thhalv10013357m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1673588-1675587 Eutrema salsugineum
Thhalv10013357m.g 5.0kb upstream 5.0kb upstream 9161 true scaffold_2: 1675588-1684748 Eutrema salsugineum
Thhalv10013357m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1679749-1684748 Eutrema salsugineum
Thhalv10013357m.g 5.0kb downstream 5.0kb downstream 9161 true scaffold_2: 1670588-1679748 Eutrema salsugineum
Thhalv10013357m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1670588-1675587 Eutrema salsugineum
Thhalv10013357m.g 10.0kb upstream 10.0kb upstream 14161 true scaffold_2: 1675588-1689748 Eutrema salsugineum
Thhalv10013357m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1679749-1689748 Eutrema salsugineum
Thhalv10013357m.g 10.0kb downstream 10.0kb downstream 14161 true scaffold_2: 1665588-1679748 Eutrema salsugineum
Thhalv10013357m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1665588-1675587 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373446 5261 Brassicaceae View MSA
123834599 5264 Brassicales-Malvales View MSA
124341075 5266 SBM View MSA
124242686 5268 Malvidae View MSA
124061333 5270 Rosid View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain