Gene : Thhalv10013109m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11709:SF66 - LACCASE-17 Genomic Order:  2073
Name:  ? Thhalv10013109m.g Secondary Identifier:  ? PAC:20205443
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5466 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013109m.g 0.5kb upstream 0.5kb upstream 3024 true scaffold_2: 8210390-8213413 Eutrema salsugineum
Thhalv10013109m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8212914-8213413 Eutrema salsugineum
Thhalv10013109m.g 0.5kb downstream 0.5kb downstream 3024 true scaffold_2: 8209890-8212913 Eutrema salsugineum
Thhalv10013109m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8209890-8210389 Eutrema salsugineum
Thhalv10013109m.g 1.0kb upstream 1.0kb upstream 3524 true scaffold_2: 8210390-8213913 Eutrema salsugineum
Thhalv10013109m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8212914-8213913 Eutrema salsugineum
Thhalv10013109m.g 1.0kb downstream 1.0kb downstream 3524 true scaffold_2: 8209390-8212913 Eutrema salsugineum
Thhalv10013109m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8209390-8210389 Eutrema salsugineum
Thhalv10013109m.g 2.0kb upstream 2.0kb upstream 4524 true scaffold_2: 8210390-8214913 Eutrema salsugineum
Thhalv10013109m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8212914-8214913 Eutrema salsugineum
Thhalv10013109m.g 2.0kb downstream 2.0kb downstream 4524 true scaffold_2: 8208390-8212913 Eutrema salsugineum
Thhalv10013109m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8208390-8210389 Eutrema salsugineum
Thhalv10013109m.g 5.0kb upstream 5.0kb upstream 7524 true scaffold_2: 8210390-8217913 Eutrema salsugineum
Thhalv10013109m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8212914-8217913 Eutrema salsugineum
Thhalv10013109m.g 5.0kb downstream 5.0kb downstream 7524 true scaffold_2: 8205390-8212913 Eutrema salsugineum
Thhalv10013109m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8205390-8210389 Eutrema salsugineum
Thhalv10013109m.g 10.0kb upstream 10.0kb upstream 12524 true scaffold_2: 8210390-8222913 Eutrema salsugineum
Thhalv10013109m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8212914-8222913 Eutrema salsugineum
Thhalv10013109m.g 10.0kb downstream 10.0kb downstream 12524 true scaffold_2: 8200390-8212913 Eutrema salsugineum
Thhalv10013109m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8200390-8210389 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361534 5261 Brassicaceae View MSA
123836632 5264 Brassicales-Malvales View MSA
124344655 5266 SBM View MSA
124251749 5268 Malvidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain