Gene : Thhalv10013193m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED Genomic Order:  2890
Name:  ? Thhalv10013193m.g Secondary Identifier:  ? PAC:20204648
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013193m.g 0.5kb upstream 0.5kb upstream 3670 true scaffold_2: 12478990-12482659 Eutrema salsugineum
Thhalv10013193m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12482160-12482659 Eutrema salsugineum
Thhalv10013193m.g 0.5kb downstream 0.5kb downstream 3670 true scaffold_2: 12478490-12482159 Eutrema salsugineum
Thhalv10013193m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12478490-12478989 Eutrema salsugineum
Thhalv10013193m.g 1.0kb upstream 1.0kb upstream 4170 true scaffold_2: 12478990-12483159 Eutrema salsugineum
Thhalv10013193m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12482160-12483159 Eutrema salsugineum
Thhalv10013193m.g 1.0kb downstream 1.0kb downstream 4170 true scaffold_2: 12477990-12482159 Eutrema salsugineum
Thhalv10013193m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12477990-12478989 Eutrema salsugineum
Thhalv10013193m.g 2.0kb upstream 2.0kb upstream 5170 true scaffold_2: 12478990-12484159 Eutrema salsugineum
Thhalv10013193m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12482160-12484159 Eutrema salsugineum
Thhalv10013193m.g 2.0kb downstream 2.0kb downstream 5170 true scaffold_2: 12476990-12482159 Eutrema salsugineum
Thhalv10013193m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12476990-12478989 Eutrema salsugineum
Thhalv10013193m.g 5.0kb upstream 5.0kb upstream 8170 true scaffold_2: 12478990-12487159 Eutrema salsugineum
Thhalv10013193m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12482160-12487159 Eutrema salsugineum
Thhalv10013193m.g 5.0kb downstream 5.0kb downstream 8170 true scaffold_2: 12473990-12482159 Eutrema salsugineum
Thhalv10013193m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12473990-12478989 Eutrema salsugineum
Thhalv10013193m.g 10.0kb upstream 10.0kb upstream 13170 true scaffold_2: 12478990-12492159 Eutrema salsugineum
Thhalv10013193m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12482160-12492159 Eutrema salsugineum
Thhalv10013193m.g 10.0kb downstream 10.0kb downstream 13170 true scaffold_2: 12468990-12482159 Eutrema salsugineum
Thhalv10013193m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12468990-12478989 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367918 5261 Brassicaceae View MSA
123834383 5264 Brassicales-Malvales View MSA
124344312 5266 SBM View MSA
124238482 5268 Malvidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain