Gene : Thhalv10013641m.g E. salsugineum v1.0
Defline:  (1 of 52) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1497
Name:  ? Thhalv10013641m.g Secondary Identifier:  ? PAC:20205615
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013641m.g 0.5kb upstream 0.5kb upstream 2423 true scaffold_2: 5780781-5783203 Eutrema salsugineum
Thhalv10013641m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5782704-5783203 Eutrema salsugineum
Thhalv10013641m.g 0.5kb downstream 0.5kb downstream 2423 true scaffold_2: 5780281-5782703 Eutrema salsugineum
Thhalv10013641m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5780281-5780780 Eutrema salsugineum
Thhalv10013641m.g 1.0kb upstream 1.0kb upstream 2923 true scaffold_2: 5780781-5783703 Eutrema salsugineum
Thhalv10013641m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5782704-5783703 Eutrema salsugineum
Thhalv10013641m.g 1.0kb downstream 1.0kb downstream 2923 true scaffold_2: 5779781-5782703 Eutrema salsugineum
Thhalv10013641m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5779781-5780780 Eutrema salsugineum
Thhalv10013641m.g 2.0kb upstream 2.0kb upstream 3923 true scaffold_2: 5780781-5784703 Eutrema salsugineum
Thhalv10013641m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5782704-5784703 Eutrema salsugineum
Thhalv10013641m.g 2.0kb downstream 2.0kb downstream 3923 true scaffold_2: 5778781-5782703 Eutrema salsugineum
Thhalv10013641m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5778781-5780780 Eutrema salsugineum
Thhalv10013641m.g 5.0kb upstream 5.0kb upstream 6923 true scaffold_2: 5780781-5787703 Eutrema salsugineum
Thhalv10013641m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5782704-5787703 Eutrema salsugineum
Thhalv10013641m.g 5.0kb downstream 5.0kb downstream 6923 true scaffold_2: 5775781-5782703 Eutrema salsugineum
Thhalv10013641m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5775781-5780780 Eutrema salsugineum
Thhalv10013641m.g 10.0kb upstream 10.0kb upstream 11923 true scaffold_2: 5780781-5792703 Eutrema salsugineum
Thhalv10013641m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5782704-5792703 Eutrema salsugineum
Thhalv10013641m.g 10.0kb downstream 10.0kb downstream 11923 true scaffold_2: 5770781-5782703 Eutrema salsugineum
Thhalv10013641m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5770781-5780780 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374002 5261 Brassicaceae View MSA
123841125 5264 Brassicales-Malvales View MSA
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain