Gene : Thhalv10013691m.g E. salsugineum v1.0
Defline:  (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  2725
Name:  ? Thhalv10013691m.g Secondary Identifier:  ? PAC:20205837
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TYRFUMCAT-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013691m.g 0.5kb upstream 0.5kb upstream 2665 true scaffold_2: 11314339-11317003 Eutrema salsugineum
Thhalv10013691m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11316504-11317003 Eutrema salsugineum
Thhalv10013691m.g 0.5kb downstream 0.5kb downstream 2665 true scaffold_2: 11313839-11316503 Eutrema salsugineum
Thhalv10013691m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11313839-11314338 Eutrema salsugineum
Thhalv10013691m.g 1.0kb upstream 1.0kb upstream 3165 true scaffold_2: 11314339-11317503 Eutrema salsugineum
Thhalv10013691m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11316504-11317503 Eutrema salsugineum
Thhalv10013691m.g 1.0kb downstream 1.0kb downstream 3165 true scaffold_2: 11313339-11316503 Eutrema salsugineum
Thhalv10013691m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11313339-11314338 Eutrema salsugineum
Thhalv10013691m.g 2.0kb upstream 2.0kb upstream 4165 true scaffold_2: 11314339-11318503 Eutrema salsugineum
Thhalv10013691m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11316504-11318503 Eutrema salsugineum
Thhalv10013691m.g 2.0kb downstream 2.0kb downstream 4165 true scaffold_2: 11312339-11316503 Eutrema salsugineum
Thhalv10013691m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11312339-11314338 Eutrema salsugineum
Thhalv10013691m.g 5.0kb upstream 5.0kb upstream 7165 true scaffold_2: 11314339-11321503 Eutrema salsugineum
Thhalv10013691m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11316504-11321503 Eutrema salsugineum
Thhalv10013691m.g 5.0kb downstream 5.0kb downstream 7165 true scaffold_2: 11309339-11316503 Eutrema salsugineum
Thhalv10013691m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11309339-11314338 Eutrema salsugineum
Thhalv10013691m.g 10.0kb upstream 10.0kb upstream 12165 true scaffold_2: 11314339-11326503 Eutrema salsugineum
Thhalv10013691m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11316504-11326503 Eutrema salsugineum
Thhalv10013691m.g 10.0kb downstream 10.0kb downstream 12165 true scaffold_2: 11304339-11316503 Eutrema salsugineum
Thhalv10013691m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11304339-11314338 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373163 5261 Brassicaceae View MSA
123829499 5264 Brassicales-Malvales View MSA
124338204 5266 SBM View MSA
124236984 5268 Malvidae View MSA
124064618 5270 Rosid View MSA
123740810 5271 Pentapetalae View MSA
122786399 5272 Eudicot View MSA
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain