Gene : Thhalv10013397m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR31650:SF1 - EMB Genomic Order:  1065
Name:  ? Thhalv10013397m.g Secondary Identifier:  ? PAC:20206623
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5885 Eutrema salsugineum pathologic  
Esalsugineum TRIGLSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013397m.g 0.5kb upstream 0.5kb upstream 2512 true scaffold_2: 4093276-4095787 Eutrema salsugineum
Thhalv10013397m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4095288-4095787 Eutrema salsugineum
Thhalv10013397m.g 0.5kb downstream 0.5kb downstream 2512 true scaffold_2: 4092776-4095287 Eutrema salsugineum
Thhalv10013397m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4092776-4093275 Eutrema salsugineum
Thhalv10013397m.g 1.0kb upstream 1.0kb upstream 3012 true scaffold_2: 4093276-4096287 Eutrema salsugineum
Thhalv10013397m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4095288-4096287 Eutrema salsugineum
Thhalv10013397m.g 1.0kb downstream 1.0kb downstream 3012 true scaffold_2: 4092276-4095287 Eutrema salsugineum
Thhalv10013397m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4092276-4093275 Eutrema salsugineum
Thhalv10013397m.g 2.0kb upstream 2.0kb upstream 4012 true scaffold_2: 4093276-4097287 Eutrema salsugineum
Thhalv10013397m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4095288-4097287 Eutrema salsugineum
Thhalv10013397m.g 2.0kb downstream 2.0kb downstream 4012 true scaffold_2: 4091276-4095287 Eutrema salsugineum
Thhalv10013397m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4091276-4093275 Eutrema salsugineum
Thhalv10013397m.g 5.0kb upstream 5.0kb upstream 7012 true scaffold_2: 4093276-4100287 Eutrema salsugineum
Thhalv10013397m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4095288-4100287 Eutrema salsugineum
Thhalv10013397m.g 5.0kb downstream 5.0kb downstream 7012 true scaffold_2: 4088276-4095287 Eutrema salsugineum
Thhalv10013397m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4088276-4093275 Eutrema salsugineum
Thhalv10013397m.g 10.0kb upstream 10.0kb upstream 12012 true scaffold_2: 4093276-4105287 Eutrema salsugineum
Thhalv10013397m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4095288-4105287 Eutrema salsugineum
Thhalv10013397m.g 10.0kb downstream 10.0kb downstream 12012 true scaffold_2: 4083276-4095287 Eutrema salsugineum
Thhalv10013397m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4083276-4093275 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380743 5261 Brassicaceae View MSA
123842139 5264 Brassicales-Malvales View MSA
124323274 5266 SBM View MSA
124169400 5268 Malvidae View MSA
124072353 5270 Rosid View MSA
123749646 5271 Pentapetalae View MSA
122794217 5272 Eudicot View MSA
122046091 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121351027 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain