Gene : Thhalv10013452m.g E. salsugineum v1.0
Defline:  (1 of 1) 1.2.1.25//1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  753
Name:  ? Thhalv10013452m.g Secondary Identifier:  ? PAC:20204141
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5046 Eutrema salsugineum pathologic  
Esalsugineum VALDEG-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013452m.g 0.5kb upstream 0.5kb upstream 3099 true scaffold_2: 2937217-2940315 Eutrema salsugineum
Thhalv10013452m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2939816-2940315 Eutrema salsugineum
Thhalv10013452m.g 0.5kb downstream 0.5kb downstream 3099 true scaffold_2: 2936717-2939815 Eutrema salsugineum
Thhalv10013452m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2936717-2937216 Eutrema salsugineum
Thhalv10013452m.g 1.0kb upstream 1.0kb upstream 3599 true scaffold_2: 2937217-2940815 Eutrema salsugineum
Thhalv10013452m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2939816-2940815 Eutrema salsugineum
Thhalv10013452m.g 1.0kb downstream 1.0kb downstream 3599 true scaffold_2: 2936217-2939815 Eutrema salsugineum
Thhalv10013452m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2936217-2937216 Eutrema salsugineum
Thhalv10013452m.g 2.0kb upstream 2.0kb upstream 4599 true scaffold_2: 2937217-2941815 Eutrema salsugineum
Thhalv10013452m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2939816-2941815 Eutrema salsugineum
Thhalv10013452m.g 2.0kb downstream 2.0kb downstream 4599 true scaffold_2: 2935217-2939815 Eutrema salsugineum
Thhalv10013452m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2935217-2937216 Eutrema salsugineum
Thhalv10013452m.g 5.0kb upstream 5.0kb upstream 7599 true scaffold_2: 2937217-2944815 Eutrema salsugineum
Thhalv10013452m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2939816-2944815 Eutrema salsugineum
Thhalv10013452m.g 5.0kb downstream 5.0kb downstream 7599 true scaffold_2: 2932217-2939815 Eutrema salsugineum
Thhalv10013452m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2932217-2937216 Eutrema salsugineum
Thhalv10013452m.g 10.0kb upstream 10.0kb upstream 12599 true scaffold_2: 2937217-2949815 Eutrema salsugineum
Thhalv10013452m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2939816-2949815 Eutrema salsugineum
Thhalv10013452m.g 10.0kb downstream 10.0kb downstream 12599 true scaffold_2: 2927217-2939815 Eutrema salsugineum
Thhalv10013452m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2927217-2937216 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374463 5261 Brassicaceae View MSA
123829479 5264 Brassicales-Malvales View MSA
124346175 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain