Gene : Thhalv10013509m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  629
Name:  ? Thhalv10013509m.g Secondary Identifier:  ? PAC:20205329
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5936 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013509m.g 0.5kb upstream 0.5kb upstream 1991 true scaffold_2: 2459204-2461194 Eutrema salsugineum
Thhalv10013509m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2459204-2459703 Eutrema salsugineum
Thhalv10013509m.g 0.5kb downstream 0.5kb downstream 1991 true scaffold_2: 2459704-2461694 Eutrema salsugineum
Thhalv10013509m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2461195-2461694 Eutrema salsugineum
Thhalv10013509m.g 1.0kb upstream 1.0kb upstream 2491 true scaffold_2: 2458704-2461194 Eutrema salsugineum
Thhalv10013509m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2458704-2459703 Eutrema salsugineum
Thhalv10013509m.g 1.0kb downstream 1.0kb downstream 2491 true scaffold_2: 2459704-2462194 Eutrema salsugineum
Thhalv10013509m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2461195-2462194 Eutrema salsugineum
Thhalv10013509m.g 2.0kb upstream 2.0kb upstream 3491 true scaffold_2: 2457704-2461194 Eutrema salsugineum
Thhalv10013509m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2457704-2459703 Eutrema salsugineum
Thhalv10013509m.g 2.0kb downstream 2.0kb downstream 3491 true scaffold_2: 2459704-2463194 Eutrema salsugineum
Thhalv10013509m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2461195-2463194 Eutrema salsugineum
Thhalv10013509m.g 5.0kb upstream 5.0kb upstream 6491 true scaffold_2: 2454704-2461194 Eutrema salsugineum
Thhalv10013509m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2454704-2459703 Eutrema salsugineum
Thhalv10013509m.g 5.0kb downstream 5.0kb downstream 6491 true scaffold_2: 2459704-2466194 Eutrema salsugineum
Thhalv10013509m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2461195-2466194 Eutrema salsugineum
Thhalv10013509m.g 10.0kb upstream 10.0kb upstream 11491 true scaffold_2: 2449704-2461194 Eutrema salsugineum
Thhalv10013509m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2449704-2459703 Eutrema salsugineum
Thhalv10013509m.g 10.0kb downstream 10.0kb downstream 11491 true scaffold_2: 2459704-2471194 Eutrema salsugineum
Thhalv10013509m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2461195-2471194 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364851 5261 Brassicaceae View MSA
123798849 5264 Brassicales-Malvales View MSA
124296432 5266 SBM View MSA
124148587 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain