Gene : Thhalv10014118m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR12548 - TRANSCRIPTION FACTOR DP Genomic Order:  207
Name:  ? Thhalv10014118m.g Secondary Identifier:  ? PAC:20205935
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10014118m.g 0.5kb upstream 0.5kb upstream 2804 true scaffold_2: 807116-809919 Eutrema salsugineum
Thhalv10014118m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 807116-807615 Eutrema salsugineum
Thhalv10014118m.g 0.5kb downstream 0.5kb downstream 2804 true scaffold_2: 807616-810419 Eutrema salsugineum
Thhalv10014118m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 809920-810419 Eutrema salsugineum
Thhalv10014118m.g 1.0kb upstream 1.0kb upstream 3304 true scaffold_2: 806616-809919 Eutrema salsugineum
Thhalv10014118m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 806616-807615 Eutrema salsugineum
Thhalv10014118m.g 1.0kb downstream 1.0kb downstream 3304 true scaffold_2: 807616-810919 Eutrema salsugineum
Thhalv10014118m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 809920-810919 Eutrema salsugineum
Thhalv10014118m.g 2.0kb upstream 2.0kb upstream 4304 true scaffold_2: 805616-809919 Eutrema salsugineum
Thhalv10014118m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 805616-807615 Eutrema salsugineum
Thhalv10014118m.g 2.0kb downstream 2.0kb downstream 4304 true scaffold_2: 807616-811919 Eutrema salsugineum
Thhalv10014118m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 809920-811919 Eutrema salsugineum
Thhalv10014118m.g 5.0kb upstream 5.0kb upstream 7304 true scaffold_2: 802616-809919 Eutrema salsugineum
Thhalv10014118m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 802616-807615 Eutrema salsugineum
Thhalv10014118m.g 5.0kb downstream 5.0kb downstream 7304 true scaffold_2: 807616-814919 Eutrema salsugineum
Thhalv10014118m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 809920-814919 Eutrema salsugineum
Thhalv10014118m.g 10.0kb upstream 10.0kb upstream 12304 true scaffold_2: 797616-809919 Eutrema salsugineum
Thhalv10014118m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 797616-807615 Eutrema salsugineum
Thhalv10014118m.g 10.0kb downstream 10.0kb downstream 12304 true scaffold_2: 807616-819919 Eutrema salsugineum
Thhalv10014118m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 809920-819919 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358013 5261 Brassicaceae Singleton cluster - no MSA
123839109 5264 Brassicales-Malvales View MSA
124336840 5266 SBM View MSA
124246539 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain