Gene : Thhalv10014133m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.1.1.220 - tRNA (adenine(58)-N(1))-methyltransferase / tRNA m(1)A(58) methyltransferase Genomic Order:  1248
Name:  ? Thhalv10014133m.g Secondary Identifier:  ? PAC:20203831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6829 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10014133m.g 0.5kb upstream 0.5kb upstream 1890 true scaffold_2: 4775396-4777285 Eutrema salsugineum
Thhalv10014133m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4775396-4775895 Eutrema salsugineum
Thhalv10014133m.g 0.5kb downstream 0.5kb downstream 1890 true scaffold_2: 4775896-4777785 Eutrema salsugineum
Thhalv10014133m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4777286-4777785 Eutrema salsugineum
Thhalv10014133m.g 1.0kb upstream 1.0kb upstream 2390 true scaffold_2: 4774896-4777285 Eutrema salsugineum
Thhalv10014133m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4774896-4775895 Eutrema salsugineum
Thhalv10014133m.g 1.0kb downstream 1.0kb downstream 2390 true scaffold_2: 4775896-4778285 Eutrema salsugineum
Thhalv10014133m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4777286-4778285 Eutrema salsugineum
Thhalv10014133m.g 2.0kb upstream 2.0kb upstream 3390 true scaffold_2: 4773896-4777285 Eutrema salsugineum
Thhalv10014133m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4773896-4775895 Eutrema salsugineum
Thhalv10014133m.g 2.0kb downstream 2.0kb downstream 3390 true scaffold_2: 4775896-4779285 Eutrema salsugineum
Thhalv10014133m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4777286-4779285 Eutrema salsugineum
Thhalv10014133m.g 5.0kb upstream 5.0kb upstream 6390 true scaffold_2: 4770896-4777285 Eutrema salsugineum
Thhalv10014133m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4770896-4775895 Eutrema salsugineum
Thhalv10014133m.g 5.0kb downstream 5.0kb downstream 6390 true scaffold_2: 4775896-4782285 Eutrema salsugineum
Thhalv10014133m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4777286-4782285 Eutrema salsugineum
Thhalv10014133m.g 10.0kb upstream 10.0kb upstream 11390 true scaffold_2: 4765896-4777285 Eutrema salsugineum
Thhalv10014133m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4765896-4775895 Eutrema salsugineum
Thhalv10014133m.g 10.0kb downstream 10.0kb downstream 11390 true scaffold_2: 4775896-4787285 Eutrema salsugineum
Thhalv10014133m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4777286-4787285 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365982 5261 Brassicaceae View MSA
123833915 5264 Brassicales-Malvales View MSA
124342887 5266 SBM View MSA
124239555 5268 Malvidae View MSA
124067339 5270 Rosid View MSA
123740177 5271 Pentapetalae View MSA
122793445 5272 Eudicot View MSA
122045272 5273 Angiosperm View MSA
121345508 5274 Embryophyte View MSA
123423922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain