Gene : Thhalv10013841m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  1875
Name:  ? Thhalv10013841m.g Secondary Identifier:  ? PAC:20205419
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum HOMOSERSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  
Esalsugineum PWY-724 Eutrema salsugineum pathologic  
Esalsugineum THRESYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013841m.g 0.5kb upstream 0.5kb upstream 4582 true scaffold_2: 7302654-7307235 Eutrema salsugineum
Thhalv10013841m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7306736-7307235 Eutrema salsugineum
Thhalv10013841m.g 0.5kb downstream 0.5kb downstream 4582 true scaffold_2: 7302154-7306735 Eutrema salsugineum
Thhalv10013841m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7302154-7302653 Eutrema salsugineum
Thhalv10013841m.g 1.0kb upstream 1.0kb upstream 5082 true scaffold_2: 7302654-7307735 Eutrema salsugineum
Thhalv10013841m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7306736-7307735 Eutrema salsugineum
Thhalv10013841m.g 1.0kb downstream 1.0kb downstream 5082 true scaffold_2: 7301654-7306735 Eutrema salsugineum
Thhalv10013841m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7301654-7302653 Eutrema salsugineum
Thhalv10013841m.g 2.0kb upstream 2.0kb upstream 6082 true scaffold_2: 7302654-7308735 Eutrema salsugineum
Thhalv10013841m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7306736-7308735 Eutrema salsugineum
Thhalv10013841m.g 2.0kb downstream 2.0kb downstream 6082 true scaffold_2: 7300654-7306735 Eutrema salsugineum
Thhalv10013841m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7300654-7302653 Eutrema salsugineum
Thhalv10013841m.g 5.0kb upstream 5.0kb upstream 9082 true scaffold_2: 7302654-7311735 Eutrema salsugineum
Thhalv10013841m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7306736-7311735 Eutrema salsugineum
Thhalv10013841m.g 5.0kb downstream 5.0kb downstream 9082 true scaffold_2: 7297654-7306735 Eutrema salsugineum
Thhalv10013841m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7297654-7302653 Eutrema salsugineum
Thhalv10013841m.g 10.0kb upstream 10.0kb upstream 14082 true scaffold_2: 7302654-7316735 Eutrema salsugineum
Thhalv10013841m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7306736-7316735 Eutrema salsugineum
Thhalv10013841m.g 10.0kb downstream 10.0kb downstream 14082 true scaffold_2: 7292654-7306735 Eutrema salsugineum
Thhalv10013841m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7292654-7302653 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373451 5261 Brassicaceae View MSA
123833269 5264 Brassicales-Malvales View MSA
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain