Gene : Thhalv10013948m.g E. salsugineum v1.0
Defline:  (1 of 7) 6.3.1.2 - Glutamate--ammonia ligase / Glutamine synthetase Genomic Order:  1446
Name:  ? Thhalv10013948m.g Secondary Identifier:  ? PAC:20203432
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLNSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3282 Eutrema salsugineum pathologic  
Esalsugineum PWY-381 Eutrema salsugineum pathologic  
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  
Esalsugineum PWY-6963 Eutrema salsugineum pathologic  
Esalsugineum PWY-6964 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013948m.g 0.5kb upstream 0.5kb upstream 3645 true scaffold_2: 5563427-5567071 Eutrema salsugineum
Thhalv10013948m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5566572-5567071 Eutrema salsugineum
Thhalv10013948m.g 0.5kb downstream 0.5kb downstream 3645 true scaffold_2: 5562927-5566571 Eutrema salsugineum
Thhalv10013948m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5562927-5563426 Eutrema salsugineum
Thhalv10013948m.g 1.0kb upstream 1.0kb upstream 4145 true scaffold_2: 5563427-5567571 Eutrema salsugineum
Thhalv10013948m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5566572-5567571 Eutrema salsugineum
Thhalv10013948m.g 1.0kb downstream 1.0kb downstream 4145 true scaffold_2: 5562427-5566571 Eutrema salsugineum
Thhalv10013948m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5562427-5563426 Eutrema salsugineum
Thhalv10013948m.g 2.0kb upstream 2.0kb upstream 5145 true scaffold_2: 5563427-5568571 Eutrema salsugineum
Thhalv10013948m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5566572-5568571 Eutrema salsugineum
Thhalv10013948m.g 2.0kb downstream 2.0kb downstream 5145 true scaffold_2: 5561427-5566571 Eutrema salsugineum
Thhalv10013948m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5561427-5563426 Eutrema salsugineum
Thhalv10013948m.g 5.0kb upstream 5.0kb upstream 8145 true scaffold_2: 5563427-5571571 Eutrema salsugineum
Thhalv10013948m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5566572-5571571 Eutrema salsugineum
Thhalv10013948m.g 5.0kb downstream 5.0kb downstream 8145 true scaffold_2: 5558427-5566571 Eutrema salsugineum
Thhalv10013948m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5558427-5563426 Eutrema salsugineum
Thhalv10013948m.g 10.0kb upstream 10.0kb upstream 13145 true scaffold_2: 5563427-5576571 Eutrema salsugineum
Thhalv10013948m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5566572-5576571 Eutrema salsugineum
Thhalv10013948m.g 10.0kb downstream 10.0kb downstream 13145 true scaffold_2: 5553427-5566571 Eutrema salsugineum
Thhalv10013948m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5553427-5563426 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376853 5261 Brassicaceae View MSA
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain