Gene : Thhalv10014065m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR15184:SF45 - ATP SYNTHASE SUBUNIT BETA-1, MITOCHONDRIAL-RELATED Genomic Order:  734
Name:  ? Thhalv10014065m.g Secondary Identifier:  ? PAC:20203266
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6126 Eutrema salsugineum pathologic  
Esalsugineum PWY-7219 Eutrema salsugineum pathologic  
Esalsugineum PWY-7229 Eutrema salsugineum pathologic  
Esalsugineum PWY-841 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10014065m.g 0.5kb upstream 0.5kb upstream 3131 true scaffold_2: 2879761-2882891 Eutrema salsugineum
Thhalv10014065m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2882392-2882891 Eutrema salsugineum
Thhalv10014065m.g 0.5kb downstream 0.5kb downstream 3131 true scaffold_2: 2879261-2882391 Eutrema salsugineum
Thhalv10014065m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2879261-2879760 Eutrema salsugineum
Thhalv10014065m.g 1.0kb upstream 1.0kb upstream 3631 true scaffold_2: 2879761-2883391 Eutrema salsugineum
Thhalv10014065m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2882392-2883391 Eutrema salsugineum
Thhalv10014065m.g 1.0kb downstream 1.0kb downstream 3631 true scaffold_2: 2878761-2882391 Eutrema salsugineum
Thhalv10014065m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2878761-2879760 Eutrema salsugineum
Thhalv10014065m.g 2.0kb upstream 2.0kb upstream 4631 true scaffold_2: 2879761-2884391 Eutrema salsugineum
Thhalv10014065m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2882392-2884391 Eutrema salsugineum
Thhalv10014065m.g 2.0kb downstream 2.0kb downstream 4631 true scaffold_2: 2877761-2882391 Eutrema salsugineum
Thhalv10014065m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2877761-2879760 Eutrema salsugineum
Thhalv10014065m.g 5.0kb upstream 5.0kb upstream 7631 true scaffold_2: 2879761-2887391 Eutrema salsugineum
Thhalv10014065m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2882392-2887391 Eutrema salsugineum
Thhalv10014065m.g 5.0kb downstream 5.0kb downstream 7631 true scaffold_2: 2874761-2882391 Eutrema salsugineum
Thhalv10014065m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2874761-2879760 Eutrema salsugineum
Thhalv10014065m.g 10.0kb upstream 10.0kb upstream 12631 true scaffold_2: 2879761-2892391 Eutrema salsugineum
Thhalv10014065m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2882392-2892391 Eutrema salsugineum
Thhalv10014065m.g 10.0kb downstream 10.0kb downstream 12631 true scaffold_2: 2869761-2882391 Eutrema salsugineum
Thhalv10014065m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2869761-2879760 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357765 5261 Brassicaceae Singleton cluster - no MSA
123795785 5264 Brassicales-Malvales Singleton cluster - no MSA
124293566 5266 SBM Singleton cluster - no MSA
124251645 5268 Malvidae View MSA
124038664 5270 Rosid View MSA
123743855 5271 Pentapetalae View MSA
122770792 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain