Gene : Thhalv10014873m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10003:SF31 - SUPEROXIDE DISMUTASE [CU-ZN] 3 Genomic Order:  1590
Name:  ? Thhalv10014873m.g Secondary Identifier:  ? PAC:20204890
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum DETOX1-PWY Eutrema salsugineum pathologic  
Esalsugineum DETOX1-PWY-1 Eutrema salsugineum pathologic  
Esalsugineum PWY-6854 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10014873m.g 0.5kb upstream 0.5kb upstream 2583 true scaffold_2: 6157787-6160369 Eutrema salsugineum
Thhalv10014873m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6157787-6158286 Eutrema salsugineum
Thhalv10014873m.g 0.5kb downstream 0.5kb downstream 2583 true scaffold_2: 6158287-6160869 Eutrema salsugineum
Thhalv10014873m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6160370-6160869 Eutrema salsugineum
Thhalv10014873m.g 1.0kb upstream 1.0kb upstream 3083 true scaffold_2: 6157287-6160369 Eutrema salsugineum
Thhalv10014873m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6157287-6158286 Eutrema salsugineum
Thhalv10014873m.g 1.0kb downstream 1.0kb downstream 3083 true scaffold_2: 6158287-6161369 Eutrema salsugineum
Thhalv10014873m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6160370-6161369 Eutrema salsugineum
Thhalv10014873m.g 2.0kb upstream 2.0kb upstream 4083 true scaffold_2: 6156287-6160369 Eutrema salsugineum
Thhalv10014873m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6156287-6158286 Eutrema salsugineum
Thhalv10014873m.g 2.0kb downstream 2.0kb downstream 4083 true scaffold_2: 6158287-6162369 Eutrema salsugineum
Thhalv10014873m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6160370-6162369 Eutrema salsugineum
Thhalv10014873m.g 5.0kb upstream 5.0kb upstream 7083 true scaffold_2: 6153287-6160369 Eutrema salsugineum
Thhalv10014873m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6153287-6158286 Eutrema salsugineum
Thhalv10014873m.g 5.0kb downstream 5.0kb downstream 7083 true scaffold_2: 6158287-6165369 Eutrema salsugineum
Thhalv10014873m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6160370-6165369 Eutrema salsugineum
Thhalv10014873m.g 10.0kb upstream 10.0kb upstream 12083 true scaffold_2: 6148287-6160369 Eutrema salsugineum
Thhalv10014873m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6148287-6158286 Eutrema salsugineum
Thhalv10014873m.g 10.0kb downstream 10.0kb downstream 12083 true scaffold_2: 6158287-6170369 Eutrema salsugineum
Thhalv10014873m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6160370-6170369 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374429 5261 Brassicaceae View MSA
123834342 5264 Brassicales-Malvales View MSA
124349995 5266 SBM View MSA
124244672 5268 Malvidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain