Gene : Thhalv10014419m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21145:SF1 - CHORISMATE MUTASE 2 Genomic Order:  910
Name:  ? Thhalv10014419m.g Secondary Identifier:  ? PAC:20205960
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3461 Eutrema salsugineum pathologic  
Esalsugineum PWY-3462 Eutrema salsugineum pathologic  
Esalsugineum PWY-3481 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10014419m.g 0.5kb upstream 0.5kb upstream 2095 true scaffold_2: 3488492-3490586 Eutrema salsugineum
Thhalv10014419m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3490087-3490586 Eutrema salsugineum
Thhalv10014419m.g 0.5kb downstream 0.5kb downstream 2095 true scaffold_2: 3487992-3490086 Eutrema salsugineum
Thhalv10014419m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3487992-3488491 Eutrema salsugineum
Thhalv10014419m.g 1.0kb upstream 1.0kb upstream 2595 true scaffold_2: 3488492-3491086 Eutrema salsugineum
Thhalv10014419m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3490087-3491086 Eutrema salsugineum
Thhalv10014419m.g 1.0kb downstream 1.0kb downstream 2595 true scaffold_2: 3487492-3490086 Eutrema salsugineum
Thhalv10014419m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3487492-3488491 Eutrema salsugineum
Thhalv10014419m.g 2.0kb upstream 2.0kb upstream 3595 true scaffold_2: 3488492-3492086 Eutrema salsugineum
Thhalv10014419m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3490087-3492086 Eutrema salsugineum
Thhalv10014419m.g 2.0kb downstream 2.0kb downstream 3595 true scaffold_2: 3486492-3490086 Eutrema salsugineum
Thhalv10014419m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3486492-3488491 Eutrema salsugineum
Thhalv10014419m.g 5.0kb upstream 5.0kb upstream 6595 true scaffold_2: 3488492-3495086 Eutrema salsugineum
Thhalv10014419m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3490087-3495086 Eutrema salsugineum
Thhalv10014419m.g 5.0kb downstream 5.0kb downstream 6595 true scaffold_2: 3483492-3490086 Eutrema salsugineum
Thhalv10014419m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3483492-3488491 Eutrema salsugineum
Thhalv10014419m.g 10.0kb upstream 10.0kb upstream 11595 true scaffold_2: 3488492-3500086 Eutrema salsugineum
Thhalv10014419m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3490087-3500086 Eutrema salsugineum
Thhalv10014419m.g 10.0kb downstream 10.0kb downstream 11595 true scaffold_2: 3478492-3490086 Eutrema salsugineum
Thhalv10014419m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3478492-3488491 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365997 5261 Brassicaceae View MSA
123835007 5264 Brassicales-Malvales View MSA
124338638 5266 SBM View MSA
124239132 5268 Malvidae View MSA
124062994 5270 Rosid View MSA
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain