Gene : Thhalv10015366m.g E. salsugineum v1.0
Defline:  (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  2053
Name:  ? Thhalv10015366m.g Secondary Identifier:  ? PAC:20203065
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6689 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10015366m.g 0.5kb upstream 0.5kb upstream 1268 true scaffold_2: 8119887-8121154 Eutrema salsugineum
Thhalv10015366m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8119887-8120386 Eutrema salsugineum
Thhalv10015366m.g 0.5kb downstream 0.5kb downstream 1268 true scaffold_2: 8120387-8121654 Eutrema salsugineum
Thhalv10015366m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8121155-8121654 Eutrema salsugineum
Thhalv10015366m.g 1.0kb upstream 1.0kb upstream 1768 true scaffold_2: 8119387-8121154 Eutrema salsugineum
Thhalv10015366m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8119387-8120386 Eutrema salsugineum
Thhalv10015366m.g 1.0kb downstream 1.0kb downstream 1768 true scaffold_2: 8120387-8122154 Eutrema salsugineum
Thhalv10015366m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8121155-8122154 Eutrema salsugineum
Thhalv10015366m.g 2.0kb upstream 2.0kb upstream 2768 true scaffold_2: 8118387-8121154 Eutrema salsugineum
Thhalv10015366m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8118387-8120386 Eutrema salsugineum
Thhalv10015366m.g 2.0kb downstream 2.0kb downstream 2768 true scaffold_2: 8120387-8123154 Eutrema salsugineum
Thhalv10015366m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8121155-8123154 Eutrema salsugineum
Thhalv10015366m.g 5.0kb upstream 5.0kb upstream 5768 true scaffold_2: 8115387-8121154 Eutrema salsugineum
Thhalv10015366m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8115387-8120386 Eutrema salsugineum
Thhalv10015366m.g 5.0kb downstream 5.0kb downstream 5768 true scaffold_2: 8120387-8126154 Eutrema salsugineum
Thhalv10015366m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8121155-8126154 Eutrema salsugineum
Thhalv10015366m.g 10.0kb upstream 10.0kb upstream 10768 true scaffold_2: 8110387-8121154 Eutrema salsugineum
Thhalv10015366m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8110387-8120386 Eutrema salsugineum
Thhalv10015366m.g 10.0kb downstream 10.0kb downstream 10768 true scaffold_2: 8120387-8131154 Eutrema salsugineum
Thhalv10015366m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8121155-8131154 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
122373562 5261 Brassicaceae View MSA
123840604 5264 Brassicales-Malvales View MSA
124346911 5266 SBM View MSA
124240586 5268 Malvidae View MSA
124064519 5270 Rosid View MSA
123739625 5271 Pentapetalae View MSA
122788641 5272 Eudicot View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain