Gene : Thhalv10015075m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED Genomic Order:  1346
Name:  ? Thhalv10015075m.g Secondary Identifier:  ? PAC:20206324
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10015075m.g 0.5kb upstream 0.5kb upstream 1309 true scaffold_2: 5176639-5177947 Eutrema salsugineum
Thhalv10015075m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5176639-5177138 Eutrema salsugineum
Thhalv10015075m.g 0.5kb downstream 0.5kb downstream 1309 true scaffold_2: 5177139-5178447 Eutrema salsugineum
Thhalv10015075m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5177948-5178447 Eutrema salsugineum
Thhalv10015075m.g 1.0kb upstream 1.0kb upstream 1809 true scaffold_2: 5176139-5177947 Eutrema salsugineum
Thhalv10015075m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5176139-5177138 Eutrema salsugineum
Thhalv10015075m.g 1.0kb downstream 1.0kb downstream 1809 true scaffold_2: 5177139-5178947 Eutrema salsugineum
Thhalv10015075m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5177948-5178947 Eutrema salsugineum
Thhalv10015075m.g 2.0kb upstream 2.0kb upstream 2809 true scaffold_2: 5175139-5177947 Eutrema salsugineum
Thhalv10015075m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5175139-5177138 Eutrema salsugineum
Thhalv10015075m.g 2.0kb downstream 2.0kb downstream 2809 true scaffold_2: 5177139-5179947 Eutrema salsugineum
Thhalv10015075m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5177948-5179947 Eutrema salsugineum
Thhalv10015075m.g 5.0kb upstream 5.0kb upstream 5809 true scaffold_2: 5172139-5177947 Eutrema salsugineum
Thhalv10015075m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5172139-5177138 Eutrema salsugineum
Thhalv10015075m.g 5.0kb downstream 5.0kb downstream 5809 true scaffold_2: 5177139-5182947 Eutrema salsugineum
Thhalv10015075m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5177948-5182947 Eutrema salsugineum
Thhalv10015075m.g 10.0kb upstream 10.0kb upstream 10809 true scaffold_2: 5167139-5177947 Eutrema salsugineum
Thhalv10015075m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5167139-5177138 Eutrema salsugineum
Thhalv10015075m.g 10.0kb downstream 10.0kb downstream 10809 true scaffold_2: 5177139-5187947 Eutrema salsugineum
Thhalv10015075m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5177948-5187947 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358050 5261 Brassicaceae Singleton cluster - no MSA
123842130 5264 Brassicales-Malvales View MSA
124323266 5266 SBM View MSA
124253135 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain