Gene : Thhalv10015951m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR22773:SF89 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2-RELATED Genomic Order:  3008
Name:  ? Thhalv10015951m.g Secondary Identifier:  ? PAC:20206609
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-4302 Eutrema salsugineum pathologic  
Esalsugineum PWY-5083 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10015951m.g 0.5kb upstream 0.5kb upstream 3712 true scaffold_2: 13464617-13468328 Eutrema salsugineum
Thhalv10015951m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13464617-13465116 Eutrema salsugineum
Thhalv10015951m.g 0.5kb downstream 0.5kb downstream 3712 true scaffold_2: 13465117-13468828 Eutrema salsugineum
Thhalv10015951m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13468329-13468828 Eutrema salsugineum
Thhalv10015951m.g 1.0kb upstream 1.0kb upstream 4212 true scaffold_2: 13464117-13468328 Eutrema salsugineum
Thhalv10015951m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13464117-13465116 Eutrema salsugineum
Thhalv10015951m.g 1.0kb downstream 1.0kb downstream 4212 true scaffold_2: 13465117-13469328 Eutrema salsugineum
Thhalv10015951m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13468329-13469328 Eutrema salsugineum
Thhalv10015951m.g 2.0kb upstream 2.0kb upstream 5212 true scaffold_2: 13463117-13468328 Eutrema salsugineum
Thhalv10015951m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13463117-13465116 Eutrema salsugineum
Thhalv10015951m.g 2.0kb downstream 2.0kb downstream 5212 true scaffold_2: 13465117-13470328 Eutrema salsugineum
Thhalv10015951m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13468329-13470328 Eutrema salsugineum
Thhalv10015951m.g 5.0kb upstream 5.0kb upstream 8212 true scaffold_2: 13460117-13468328 Eutrema salsugineum
Thhalv10015951m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13460117-13465116 Eutrema salsugineum
Thhalv10015951m.g 5.0kb downstream 5.0kb downstream 8212 true scaffold_2: 13465117-13473328 Eutrema salsugineum
Thhalv10015951m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13468329-13473328 Eutrema salsugineum
Thhalv10015951m.g 10.0kb upstream 10.0kb upstream 13212 true scaffold_2: 13455117-13468328 Eutrema salsugineum
Thhalv10015951m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13455117-13465116 Eutrema salsugineum
Thhalv10015951m.g 10.0kb downstream 10.0kb downstream 13212 true scaffold_2: 13465117-13478328 Eutrema salsugineum
Thhalv10015951m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13468329-13478328 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358081 5261 Brassicaceae Singleton cluster - no MSA
123796076 5264 Brassicales-Malvales Singleton cluster - no MSA
124293844 5266 SBM Singleton cluster - no MSA
124146445 5268 Malvidae Singleton cluster - no MSA
124072879 5270 Rosid View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain