Gene : Thhalv10016107m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR30239:SF6 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTIC Genomic Order:  1419
Name:  ? Thhalv10016107m.g Secondary Identifier:  ? PAC:20205552
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum BRANCHED-CHAIN-AA-SYN-PWY Eutrema salsugineum pathologic  
Esalsugineum ILEUSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  
Esalsugineum VALSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016107m.g 0.5kb upstream 0.5kb upstream 4708 true scaffold_2: 5472922-5477629 Eutrema salsugineum
Thhalv10016107m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5472922-5473421 Eutrema salsugineum
Thhalv10016107m.g 0.5kb downstream 0.5kb downstream 4708 true scaffold_2: 5473422-5478129 Eutrema salsugineum
Thhalv10016107m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5477630-5478129 Eutrema salsugineum
Thhalv10016107m.g 1.0kb upstream 1.0kb upstream 5208 true scaffold_2: 5472422-5477629 Eutrema salsugineum
Thhalv10016107m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5472422-5473421 Eutrema salsugineum
Thhalv10016107m.g 1.0kb downstream 1.0kb downstream 5208 true scaffold_2: 5473422-5478629 Eutrema salsugineum
Thhalv10016107m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5477630-5478629 Eutrema salsugineum
Thhalv10016107m.g 2.0kb upstream 2.0kb upstream 6208 true scaffold_2: 5471422-5477629 Eutrema salsugineum
Thhalv10016107m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5471422-5473421 Eutrema salsugineum
Thhalv10016107m.g 2.0kb downstream 2.0kb downstream 6208 true scaffold_2: 5473422-5479629 Eutrema salsugineum
Thhalv10016107m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5477630-5479629 Eutrema salsugineum
Thhalv10016107m.g 5.0kb upstream 5.0kb upstream 9208 true scaffold_2: 5468422-5477629 Eutrema salsugineum
Thhalv10016107m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5468422-5473421 Eutrema salsugineum
Thhalv10016107m.g 5.0kb downstream 5.0kb downstream 9208 true scaffold_2: 5473422-5482629 Eutrema salsugineum
Thhalv10016107m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5477630-5482629 Eutrema salsugineum
Thhalv10016107m.g 10.0kb upstream 10.0kb upstream 14208 true scaffold_2: 5463422-5477629 Eutrema salsugineum
Thhalv10016107m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5463422-5473421 Eutrema salsugineum
Thhalv10016107m.g 10.0kb downstream 10.0kb downstream 14208 true scaffold_2: 5473422-5487629 Eutrema salsugineum
Thhalv10016107m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5477630-5487629 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122368277 5261 Brassicaceae View MSA
123831062 5264 Brassicales-Malvales View MSA
124348277 5266 SBM View MSA
124249637 5268 Malvidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain