Gene : Thhalv10000795m.g E. salsugineum v1.0

Defline:  (1 of 2) PTHR31066:SF12 - EXPRESSED PROTEIN Genomic Order:  417
Name:  ? Thhalv10000795m.g Secondary Identifier:  ? PAC:20202880

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10000795m.g 0.5kb upstream 0.5kb upstream 3114 true scaffold_20: 2538646-2541759 Eutrema salsugineum
Thhalv10000795m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_20: 2538646-2539145 Eutrema salsugineum
Thhalv10000795m.g 0.5kb downstream 0.5kb downstream 3114 true scaffold_20: 2539146-2542259 Eutrema salsugineum
Thhalv10000795m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_20: 2541760-2542259 Eutrema salsugineum
Thhalv10000795m.g 1.0kb upstream 1.0kb upstream 3614 true scaffold_20: 2538146-2541759 Eutrema salsugineum
Thhalv10000795m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_20: 2538146-2539145 Eutrema salsugineum
Thhalv10000795m.g 1.0kb downstream 1.0kb downstream 3614 true scaffold_20: 2539146-2542759 Eutrema salsugineum
Thhalv10000795m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_20: 2541760-2542759 Eutrema salsugineum
Thhalv10000795m.g 2.0kb upstream 2.0kb upstream 4614 true scaffold_20: 2537146-2541759 Eutrema salsugineum
Thhalv10000795m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_20: 2537146-2539145 Eutrema salsugineum
Thhalv10000795m.g 2.0kb downstream 2.0kb downstream 4614 true scaffold_20: 2539146-2543759 Eutrema salsugineum
Thhalv10000795m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_20: 2541760-2543759 Eutrema salsugineum
Thhalv10000795m.g 5.0kb upstream 5.0kb upstream 7614 true scaffold_20: 2534146-2541759 Eutrema salsugineum
Thhalv10000795m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_20: 2534146-2539145 Eutrema salsugineum
Thhalv10000795m.g 5.0kb downstream 5.0kb downstream 7614 true scaffold_20: 2539146-2546759 Eutrema salsugineum
Thhalv10000795m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_20: 2541760-2546759 Eutrema salsugineum
Thhalv10000795m.g 10.0kb upstream 10.0kb upstream 12614 true scaffold_20: 2529146-2541759 Eutrema salsugineum
Thhalv10000795m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_20: 2529146-2539145 Eutrema salsugineum
Thhalv10000795m.g 10.0kb downstream 10.0kb downstream 12614 true scaffold_20: 2539146-2551759 Eutrema salsugineum
Thhalv10000795m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_20: 2541760-2551759 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372294 5261 Brassicaceae View MSA
123830196 5264 Brassicales-Malvales View MSA
124345523 5266 SBM View MSA
124241143 5268 Malvidae View MSA
124062751 5270 Rosid View MSA
123746774 5271 Pentapetalae View MSA
122786631 5272 Eudicot View MSA
122047494 5273 Angiosperm View MSA
121310747 5274 Embryophyte View MSA
123348158 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain