Gene : Thhalv10015765m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR13149 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 Genomic Order:  3179
Name:  ? Thhalv10015765m.g Secondary Identifier:  ? PAC:20205744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10015765m.g 0.5kb upstream 0.5kb upstream 1668 true scaffold_2: 15906839-15908506 Eutrema salsugineum
Thhalv10015765m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 15908007-15908506 Eutrema salsugineum
Thhalv10015765m.g 0.5kb downstream 0.5kb downstream 1668 true scaffold_2: 15906339-15908006 Eutrema salsugineum
Thhalv10015765m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 15906339-15906838 Eutrema salsugineum
Thhalv10015765m.g 1.0kb upstream 1.0kb upstream 2168 true scaffold_2: 15906839-15909006 Eutrema salsugineum
Thhalv10015765m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 15908007-15909006 Eutrema salsugineum
Thhalv10015765m.g 1.0kb downstream 1.0kb downstream 2168 true scaffold_2: 15905839-15908006 Eutrema salsugineum
Thhalv10015765m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 15905839-15906838 Eutrema salsugineum
Thhalv10015765m.g 2.0kb upstream 2.0kb upstream 3168 true scaffold_2: 15906839-15910006 Eutrema salsugineum
Thhalv10015765m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 15908007-15910006 Eutrema salsugineum
Thhalv10015765m.g 2.0kb downstream 2.0kb downstream 3168 true scaffold_2: 15904839-15908006 Eutrema salsugineum
Thhalv10015765m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 15904839-15906838 Eutrema salsugineum
Thhalv10015765m.g 5.0kb upstream 5.0kb upstream 6168 true scaffold_2: 15906839-15913006 Eutrema salsugineum
Thhalv10015765m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 15908007-15913006 Eutrema salsugineum
Thhalv10015765m.g 5.0kb downstream 5.0kb downstream 6168 true scaffold_2: 15901839-15908006 Eutrema salsugineum
Thhalv10015765m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 15901839-15906838 Eutrema salsugineum
Thhalv10015765m.g 10.0kb upstream 10.0kb upstream 11168 true scaffold_2: 15906839-15918006 Eutrema salsugineum
Thhalv10015765m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 15908007-15918006 Eutrema salsugineum
Thhalv10015765m.g 10.0kb downstream 10.0kb downstream 11168 true scaffold_2: 15896839-15908006 Eutrema salsugineum
Thhalv10015765m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 15896839-15906838 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369376 5261 Brassicaceae View MSA
123833632 5264 Brassicales-Malvales View MSA
124342864 5266 SBM View MSA
124253535 5268 Malvidae View MSA
124065529 5270 Rosid View MSA
123740104 5271 Pentapetalae View MSA
122789315 5272 Eudicot View MSA
122043076 5273 Angiosperm View MSA
121347128 5274 Embryophyte View MSA
123424055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain