Gene : Thhalv10015869m.g E. salsugineum v1.0

Defline:  (1 of 34) PTHR31232:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  299
Name:  ? Thhalv10015869m.g Secondary Identifier:  ? PAC:20203567

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10015869m.g 0.5kb upstream 0.5kb upstream 914 true scaffold_2: 1194123-1195036 Eutrema salsugineum
Thhalv10015869m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1194123-1194622 Eutrema salsugineum
Thhalv10015869m.g 0.5kb downstream 0.5kb downstream 914 true scaffold_2: 1194623-1195536 Eutrema salsugineum
Thhalv10015869m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1195037-1195536 Eutrema salsugineum
Thhalv10015869m.g 1.0kb upstream 1.0kb upstream 1414 true scaffold_2: 1193623-1195036 Eutrema salsugineum
Thhalv10015869m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1193623-1194622 Eutrema salsugineum
Thhalv10015869m.g 1.0kb downstream 1.0kb downstream 1414 true scaffold_2: 1194623-1196036 Eutrema salsugineum
Thhalv10015869m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1195037-1196036 Eutrema salsugineum
Thhalv10015869m.g 2.0kb upstream 2.0kb upstream 2414 true scaffold_2: 1192623-1195036 Eutrema salsugineum
Thhalv10015869m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1192623-1194622 Eutrema salsugineum
Thhalv10015869m.g 2.0kb downstream 2.0kb downstream 2414 true scaffold_2: 1194623-1197036 Eutrema salsugineum
Thhalv10015869m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1195037-1197036 Eutrema salsugineum
Thhalv10015869m.g 5.0kb upstream 5.0kb upstream 5414 true scaffold_2: 1189623-1195036 Eutrema salsugineum
Thhalv10015869m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1189623-1194622 Eutrema salsugineum
Thhalv10015869m.g 5.0kb downstream 5.0kb downstream 5414 true scaffold_2: 1194623-1200036 Eutrema salsugineum
Thhalv10015869m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1195037-1200036 Eutrema salsugineum
Thhalv10015869m.g 10.0kb upstream 10.0kb upstream 10414 true scaffold_2: 1184623-1195036 Eutrema salsugineum
Thhalv10015869m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1184623-1194622 Eutrema salsugineum
Thhalv10015869m.g 10.0kb downstream 10.0kb downstream 10414 true scaffold_2: 1194623-1205036 Eutrema salsugineum
Thhalv10015869m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1195037-1205036 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378479 5261 Brassicaceae View MSA
123801879 5264 Brassicales-Malvales View MSA
124299132 5266 SBM View MSA
124252657 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain