Gene : Thhalv10001183m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  51
Name:  ? Thhalv10001183m.g Secondary Identifier:  ? PAC:20202563
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5963 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001183m.g 0.5kb upstream 0.5kb upstream 2187 true scaffold_20: 408271-410457 Eutrema salsugineum
Thhalv10001183m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_20: 408271-408770 Eutrema salsugineum
Thhalv10001183m.g 0.5kb downstream 0.5kb downstream 2187 true scaffold_20: 408771-410957 Eutrema salsugineum
Thhalv10001183m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_20: 410458-410957 Eutrema salsugineum
Thhalv10001183m.g 1.0kb upstream 1.0kb upstream 2687 true scaffold_20: 407771-410457 Eutrema salsugineum
Thhalv10001183m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_20: 407771-408770 Eutrema salsugineum
Thhalv10001183m.g 1.0kb downstream 1.0kb downstream 2687 true scaffold_20: 408771-411457 Eutrema salsugineum
Thhalv10001183m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_20: 410458-411457 Eutrema salsugineum
Thhalv10001183m.g 2.0kb upstream 2.0kb upstream 3687 true scaffold_20: 406771-410457 Eutrema salsugineum
Thhalv10001183m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_20: 406771-408770 Eutrema salsugineum
Thhalv10001183m.g 2.0kb downstream 2.0kb downstream 3687 true scaffold_20: 408771-412457 Eutrema salsugineum
Thhalv10001183m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_20: 410458-412457 Eutrema salsugineum
Thhalv10001183m.g 5.0kb upstream 5.0kb upstream 6687 true scaffold_20: 403771-410457 Eutrema salsugineum
Thhalv10001183m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_20: 403771-408770 Eutrema salsugineum
Thhalv10001183m.g 5.0kb downstream 5.0kb downstream 6687 true scaffold_20: 408771-415457 Eutrema salsugineum
Thhalv10001183m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_20: 410458-415457 Eutrema salsugineum
Thhalv10001183m.g 10.0kb upstream 10.0kb upstream 11687 true scaffold_20: 398771-410457 Eutrema salsugineum
Thhalv10001183m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_20: 398771-408770 Eutrema salsugineum
Thhalv10001183m.g 10.0kb downstream 10.0kb downstream 11687 true scaffold_20: 408771-420457 Eutrema salsugineum
Thhalv10001183m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_20: 410458-420457 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031182 5273 Angiosperm View MSA
122358095 5261 Brassicaceae Singleton cluster - no MSA
123796088 5264 Brassicales-Malvales Singleton cluster - no MSA
124293856 5266 SBM Singleton cluster - no MSA
124146454 5268 Malvidae Singleton cluster - no MSA
123872736 5270 Rosid Singleton cluster - no MSA
123456867 5271 Pentapetalae Singleton cluster - no MSA
122492288 5272 Eudicot Singleton cluster - no MSA
123428941 5275 Viridiplantae View MSA
121300268 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain