Gene : Thhalv10001252m.g E. salsugineum v1.0
Defline:  (1 of 1) 4.2.1.75 - Uroporphyrinogen-III synthase / Uroporphyrinogen-III cosynthetase Genomic Order:  4
Name:  ? Thhalv10001252m.g Secondary Identifier:  ? PAC:20208989
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5188 Eutrema salsugineum pathologic  
Esalsugineum PWY-5918 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001252m.g 0.5kb upstream 0.5kb upstream 4005 true scaffold_21: 595624-599628 Eutrema salsugineum
Thhalv10001252m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 599129-599628 Eutrema salsugineum
Thhalv10001252m.g 0.5kb downstream 0.5kb downstream 4005 true scaffold_21: 595124-599128 Eutrema salsugineum
Thhalv10001252m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 595124-595623 Eutrema salsugineum
Thhalv10001252m.g 1.0kb upstream 1.0kb upstream 4505 true scaffold_21: 595624-600128 Eutrema salsugineum
Thhalv10001252m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 599129-600128 Eutrema salsugineum
Thhalv10001252m.g 1.0kb downstream 1.0kb downstream 4505 true scaffold_21: 594624-599128 Eutrema salsugineum
Thhalv10001252m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 594624-595623 Eutrema salsugineum
Thhalv10001252m.g 2.0kb upstream 2.0kb upstream 5505 true scaffold_21: 595624-601128 Eutrema salsugineum
Thhalv10001252m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 599129-601128 Eutrema salsugineum
Thhalv10001252m.g 2.0kb downstream 2.0kb downstream 5505 true scaffold_21: 593624-599128 Eutrema salsugineum
Thhalv10001252m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 593624-595623 Eutrema salsugineum
Thhalv10001252m.g 5.0kb upstream 5.0kb upstream 8505 true scaffold_21: 595624-604128 Eutrema salsugineum
Thhalv10001252m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 599129-604128 Eutrema salsugineum
Thhalv10001252m.g 5.0kb downstream 5.0kb downstream 8505 true scaffold_21: 590624-599128 Eutrema salsugineum
Thhalv10001252m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 590624-595623 Eutrema salsugineum
Thhalv10001252m.g 10.0kb upstream 10.0kb upstream 13505 true scaffold_21: 595624-609128 Eutrema salsugineum
Thhalv10001252m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 599129-609128 Eutrema salsugineum
Thhalv10001252m.g 10.0kb downstream 10.0kb downstream 13505 true scaffold_21: 585624-599128 Eutrema salsugineum
Thhalv10001252m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 585624-595623 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381443 5261 Brassicaceae View MSA
123827452 5264 Brassicales-Malvales View MSA
124338211 5266 SBM View MSA
124240174 5268 Malvidae View MSA
124064884 5270 Rosid View MSA
123747400 5271 Pentapetalae View MSA
122796424 5272 Eudicot View MSA
122042127 5273 Angiosperm View MSA
121345873 5274 Embryophyte View MSA
123424653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain