Gene : Thhalv10001047m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 Genomic Order:  22
Name:  ? Thhalv10001047m.g Secondary Identifier:  ? PAC:20202550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001047m.g 0.5kb upstream 0.5kb upstream 2230 true scaffold_20: 119758-121987 Eutrema salsugineum
Thhalv10001047m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_20: 121488-121987 Eutrema salsugineum
Thhalv10001047m.g 0.5kb downstream 0.5kb downstream 2230 true scaffold_20: 119258-121487 Eutrema salsugineum
Thhalv10001047m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_20: 119258-119757 Eutrema salsugineum
Thhalv10001047m.g 1.0kb upstream 1.0kb upstream 2730 true scaffold_20: 119758-122487 Eutrema salsugineum
Thhalv10001047m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_20: 121488-122487 Eutrema salsugineum
Thhalv10001047m.g 1.0kb downstream 1.0kb downstream 2730 true scaffold_20: 118758-121487 Eutrema salsugineum
Thhalv10001047m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_20: 118758-119757 Eutrema salsugineum
Thhalv10001047m.g 2.0kb upstream 2.0kb upstream 3730 true scaffold_20: 119758-123487 Eutrema salsugineum
Thhalv10001047m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_20: 121488-123487 Eutrema salsugineum
Thhalv10001047m.g 2.0kb downstream 2.0kb downstream 3730 true scaffold_20: 117758-121487 Eutrema salsugineum
Thhalv10001047m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_20: 117758-119757 Eutrema salsugineum
Thhalv10001047m.g 5.0kb upstream 5.0kb upstream 6730 true scaffold_20: 119758-126487 Eutrema salsugineum
Thhalv10001047m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_20: 121488-126487 Eutrema salsugineum
Thhalv10001047m.g 5.0kb downstream 5.0kb downstream 6730 true scaffold_20: 114758-121487 Eutrema salsugineum
Thhalv10001047m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_20: 114758-119757 Eutrema salsugineum
Thhalv10001047m.g 10.0kb upstream 10.0kb upstream 11730 true scaffold_20: 119758-131487 Eutrema salsugineum
Thhalv10001047m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_20: 121488-131487 Eutrema salsugineum
Thhalv10001047m.g 10.0kb downstream 10.0kb downstream 11730 true scaffold_20: 109758-121487 Eutrema salsugineum
Thhalv10001047m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_20: 109758-119757 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375740 5261 Brassicaceae View MSA
123835854 5264 Brassicales-Malvales View MSA
124344171 5266 SBM View MSA
124253949 5268 Malvidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain