Gene : Thhalv10001733m.g E. salsugineum v1.0
Defline:  (1 of 1) 1.13.11.71 - Carotenoid-9',10'-cleaving dioxygenase / Beta-carotene 9',10'-monooxygenase Genomic Order:  177
Name:  ? Thhalv10001733m.g Secondary Identifier:  ? PAC:20189233
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7101 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001733m.g 0.5kb upstream 0.5kb upstream 3027 true scaffold_22: 667408-670434 Eutrema salsugineum
Thhalv10001733m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 667408-667907 Eutrema salsugineum
Thhalv10001733m.g 0.5kb downstream 0.5kb downstream 3027 true scaffold_22: 667908-670934 Eutrema salsugineum
Thhalv10001733m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 670435-670934 Eutrema salsugineum
Thhalv10001733m.g 1.0kb upstream 1.0kb upstream 3527 true scaffold_22: 666908-670434 Eutrema salsugineum
Thhalv10001733m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 666908-667907 Eutrema salsugineum
Thhalv10001733m.g 1.0kb downstream 1.0kb downstream 3527 true scaffold_22: 667908-671434 Eutrema salsugineum
Thhalv10001733m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 670435-671434 Eutrema salsugineum
Thhalv10001733m.g 2.0kb upstream 2.0kb upstream 4527 true scaffold_22: 665908-670434 Eutrema salsugineum
Thhalv10001733m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 665908-667907 Eutrema salsugineum
Thhalv10001733m.g 2.0kb downstream 2.0kb downstream 4527 true scaffold_22: 667908-672434 Eutrema salsugineum
Thhalv10001733m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 670435-672434 Eutrema salsugineum
Thhalv10001733m.g 5.0kb upstream 5.0kb upstream 7527 true scaffold_22: 662908-670434 Eutrema salsugineum
Thhalv10001733m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 662908-667907 Eutrema salsugineum
Thhalv10001733m.g 5.0kb downstream 5.0kb downstream 7527 true scaffold_22: 667908-675434 Eutrema salsugineum
Thhalv10001733m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 670435-675434 Eutrema salsugineum
Thhalv10001733m.g 10.0kb upstream 10.0kb upstream 12527 true scaffold_22: 657908-670434 Eutrema salsugineum
Thhalv10001733m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 657908-667907 Eutrema salsugineum
Thhalv10001733m.g 10.0kb downstream 10.0kb downstream 12527 true scaffold_22: 667908-680434 Eutrema salsugineum
Thhalv10001733m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 670435-680434 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364004 5261 Brassicaceae View MSA
123829529 5264 Brassicales-Malvales View MSA
124346337 5266 SBM View MSA
124240991 5268 Malvidae View MSA
124061510 5270 Rosid View MSA
123739443 5271 Pentapetalae View MSA
122788061 5272 Eudicot View MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain