Gene : Thhalv10001373m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR31901:SF3 - JASMONIC ACID-AMIDO SYNTHETASE JAR1 Genomic Order:  304
Name:  ? Thhalv10001373m.g Secondary Identifier:  ? PAC:20189125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001373m.g 0.5kb upstream 0.5kb upstream 3931 true scaffold_22: 1183199-1187129 Eutrema salsugineum
Thhalv10001373m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 1183199-1183698 Eutrema salsugineum
Thhalv10001373m.g 0.5kb downstream 0.5kb downstream 3931 true scaffold_22: 1183699-1187629 Eutrema salsugineum
Thhalv10001373m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 1187130-1187629 Eutrema salsugineum
Thhalv10001373m.g 1.0kb upstream 1.0kb upstream 4431 true scaffold_22: 1182699-1187129 Eutrema salsugineum
Thhalv10001373m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 1182699-1183698 Eutrema salsugineum
Thhalv10001373m.g 1.0kb downstream 1.0kb downstream 4431 true scaffold_22: 1183699-1188129 Eutrema salsugineum
Thhalv10001373m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 1187130-1188129 Eutrema salsugineum
Thhalv10001373m.g 2.0kb upstream 2.0kb upstream 5431 true scaffold_22: 1181699-1187129 Eutrema salsugineum
Thhalv10001373m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 1181699-1183698 Eutrema salsugineum
Thhalv10001373m.g 2.0kb downstream 2.0kb downstream 5431 true scaffold_22: 1183699-1189129 Eutrema salsugineum
Thhalv10001373m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 1187130-1189129 Eutrema salsugineum
Thhalv10001373m.g 5.0kb upstream 5.0kb upstream 8431 true scaffold_22: 1178699-1187129 Eutrema salsugineum
Thhalv10001373m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 1178699-1183698 Eutrema salsugineum
Thhalv10001373m.g 5.0kb downstream 5.0kb downstream 8431 true scaffold_22: 1183699-1192129 Eutrema salsugineum
Thhalv10001373m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 1187130-1192129 Eutrema salsugineum
Thhalv10001373m.g 10.0kb upstream 10.0kb upstream 13431 true scaffold_22: 1173699-1187129 Eutrema salsugineum
Thhalv10001373m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 1173699-1183698 Eutrema salsugineum
Thhalv10001373m.g 10.0kb downstream 10.0kb downstream 13431 true scaffold_22: 1183699-1197129 Eutrema salsugineum
Thhalv10001373m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 1187130-1197129 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370144 5261 Brassicaceae View MSA
123839817 5264 Brassicales-Malvales View MSA
124351107 5266 SBM View MSA
124245184 5268 Malvidae View MSA
124063080 5270 Rosid View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain