Gene : Thhalv10001507m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  279
Name:  ? Thhalv10001507m.g Secondary Identifier:  ? PAC:20188915
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7039 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001507m.g 0.5kb upstream 0.5kb upstream 2724 true scaffold_22: 1093602-1096325 Eutrema salsugineum
Thhalv10001507m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 1093602-1094101 Eutrema salsugineum
Thhalv10001507m.g 0.5kb downstream 0.5kb downstream 2724 true scaffold_22: 1094102-1096825 Eutrema salsugineum
Thhalv10001507m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 1096326-1096825 Eutrema salsugineum
Thhalv10001507m.g 1.0kb upstream 1.0kb upstream 3224 true scaffold_22: 1093102-1096325 Eutrema salsugineum
Thhalv10001507m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 1093102-1094101 Eutrema salsugineum
Thhalv10001507m.g 1.0kb downstream 1.0kb downstream 3224 true scaffold_22: 1094102-1097325 Eutrema salsugineum
Thhalv10001507m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 1096326-1097325 Eutrema salsugineum
Thhalv10001507m.g 2.0kb upstream 2.0kb upstream 4224 true scaffold_22: 1092102-1096325 Eutrema salsugineum
Thhalv10001507m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 1092102-1094101 Eutrema salsugineum
Thhalv10001507m.g 2.0kb downstream 2.0kb downstream 4224 true scaffold_22: 1094102-1098325 Eutrema salsugineum
Thhalv10001507m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 1096326-1098325 Eutrema salsugineum
Thhalv10001507m.g 5.0kb upstream 5.0kb upstream 7224 true scaffold_22: 1089102-1096325 Eutrema salsugineum
Thhalv10001507m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 1089102-1094101 Eutrema salsugineum
Thhalv10001507m.g 5.0kb downstream 5.0kb downstream 7224 true scaffold_22: 1094102-1101325 Eutrema salsugineum
Thhalv10001507m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 1096326-1101325 Eutrema salsugineum
Thhalv10001507m.g 10.0kb upstream 10.0kb upstream 12224 true scaffold_22: 1084102-1096325 Eutrema salsugineum
Thhalv10001507m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 1084102-1094101 Eutrema salsugineum
Thhalv10001507m.g 10.0kb downstream 10.0kb downstream 12224 true scaffold_22: 1094102-1106325 Eutrema salsugineum
Thhalv10001507m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 1096326-1106325 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379587 5261 Brassicaceae View MSA
123830792 5264 Brassicales-Malvales View MSA
124343149 5266 SBM View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain