Gene : Thhalv10022460m.g E. salsugineum v1.0

Defline:  (1 of 2) KOG0964 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) Genomic Order:  1
Name:  ? Thhalv10022460m.g Secondary Identifier:  ? PAC:20202503

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022460m.g 0.5kb upstream 0.5kb upstream 5513 true scaffold_24: 232866-238378 Eutrema salsugineum
Thhalv10022460m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_24: 232866-233365 Eutrema salsugineum
Thhalv10022460m.g 0.5kb downstream 0.5kb downstream 5513 true scaffold_24: 233366-238878 Eutrema salsugineum
Thhalv10022460m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_24: 238379-238878 Eutrema salsugineum
Thhalv10022460m.g 1.0kb upstream 1.0kb upstream 6013 true scaffold_24: 232366-238378 Eutrema salsugineum
Thhalv10022460m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_24: 232366-233365 Eutrema salsugineum
Thhalv10022460m.g 1.0kb downstream 1.0kb downstream 6013 true scaffold_24: 233366-239378 Eutrema salsugineum
Thhalv10022460m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_24: 238379-239378 Eutrema salsugineum
Thhalv10022460m.g 2.0kb upstream 2.0kb upstream 7013 true scaffold_24: 231366-238378 Eutrema salsugineum
Thhalv10022460m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_24: 231366-233365 Eutrema salsugineum
Thhalv10022460m.g 2.0kb downstream 2.0kb downstream 7013 true scaffold_24: 233366-240378 Eutrema salsugineum
Thhalv10022460m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_24: 238379-240378 Eutrema salsugineum
Thhalv10022460m.g 5.0kb upstream 5.0kb upstream 10013 true scaffold_24: 228366-238378 Eutrema salsugineum
Thhalv10022460m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_24: 228366-233365 Eutrema salsugineum
Thhalv10022460m.g 5.0kb downstream 5.0kb downstream 10013 true scaffold_24: 233366-243378 Eutrema salsugineum
Thhalv10022460m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_24: 238379-243378 Eutrema salsugineum
Thhalv10022460m.g 10.0kb upstream 10.0kb upstream 15013 true scaffold_24: 223366-238378 Eutrema salsugineum
Thhalv10022460m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_24: 223366-233365 Eutrema salsugineum
Thhalv10022460m.g 10.0kb downstream 10.0kb downstream 15013 true scaffold_24: 233366-248378 Eutrema salsugineum
Thhalv10022460m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_24: 238379-248378 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363577 5261 Brassicaceae View MSA
123798568 5264 Brassicales-Malvales View MSA
124296187 5266 SBM View MSA
124148412 5268 Malvidae View MSA
123874410 5270 Rosid View MSA
123751003 5271 Pentapetalae View MSA
122791689 5272 Eudicot View MSA
122044031 5273 Angiosperm View MSA
121351485 5274 Embryophyte View MSA
123382184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain