Gene : Thhalv10028900m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10371 - NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL Genomic Order:  251
Name:  ? Thhalv10028900m.g Secondary Identifier:  ? PAC:20197978
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-4302 Eutrema salsugineum pathologic  
Esalsugineum PWY-5083 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028900m.g 0.5kb upstream 0.5kb upstream 3243 true scaffold_3: 1236453-1239695 Eutrema salsugineum
Thhalv10028900m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1236453-1236952 Eutrema salsugineum
Thhalv10028900m.g 0.5kb downstream 0.5kb downstream 3243 true scaffold_3: 1236953-1240195 Eutrema salsugineum
Thhalv10028900m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1239696-1240195 Eutrema salsugineum
Thhalv10028900m.g 1.0kb upstream 1.0kb upstream 3743 true scaffold_3: 1235953-1239695 Eutrema salsugineum
Thhalv10028900m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1235953-1236952 Eutrema salsugineum
Thhalv10028900m.g 1.0kb downstream 1.0kb downstream 3743 true scaffold_3: 1236953-1240695 Eutrema salsugineum
Thhalv10028900m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1239696-1240695 Eutrema salsugineum
Thhalv10028900m.g 2.0kb upstream 2.0kb upstream 4743 true scaffold_3: 1234953-1239695 Eutrema salsugineum
Thhalv10028900m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1234953-1236952 Eutrema salsugineum
Thhalv10028900m.g 2.0kb downstream 2.0kb downstream 4743 true scaffold_3: 1236953-1241695 Eutrema salsugineum
Thhalv10028900m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1239696-1241695 Eutrema salsugineum
Thhalv10028900m.g 5.0kb upstream 5.0kb upstream 7743 true scaffold_3: 1231953-1239695 Eutrema salsugineum
Thhalv10028900m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1231953-1236952 Eutrema salsugineum
Thhalv10028900m.g 5.0kb downstream 5.0kb downstream 7743 true scaffold_3: 1236953-1244695 Eutrema salsugineum
Thhalv10028900m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1239696-1244695 Eutrema salsugineum
Thhalv10028900m.g 10.0kb upstream 10.0kb upstream 12743 true scaffold_3: 1226953-1239695 Eutrema salsugineum
Thhalv10028900m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1226953-1236952 Eutrema salsugineum
Thhalv10028900m.g 10.0kb downstream 10.0kb downstream 12743 true scaffold_3: 1236953-1249695 Eutrema salsugineum
Thhalv10028900m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1239696-1249695 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368476 5261 Brassicaceae View MSA
123830423 5264 Brassicales-Malvales View MSA
124338790 5266 SBM View MSA
124243026 5268 Malvidae View MSA
124065216 5270 Rosid View MSA
123739093 5271 Pentapetalae View MSA
122789216 5272 Eudicot View MSA
122047748 5273 Angiosperm View MSA
121350810 5274 Embryophyte View MSA
123425059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain