Gene : Thhalv10028798m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE Genomic Order:  56
Name:  ? Thhalv10028798m.g Secondary Identifier:  ? PAC:20197577
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ETHYL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5041 Eutrema salsugineum pathologic  
Esalsugineum PWY-7270 Eutrema salsugineum pathologic  
Esalsugineum PWY-7528 Eutrema salsugineum pathologic  
Esalsugineum SAM-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028798m.g 0.5kb upstream 0.5kb upstream 2115 true scaffold_3: 242634-244748 Eutrema salsugineum
Thhalv10028798m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 244249-244748 Eutrema salsugineum
Thhalv10028798m.g 0.5kb downstream 0.5kb downstream 2115 true scaffold_3: 242134-244248 Eutrema salsugineum
Thhalv10028798m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 242134-242633 Eutrema salsugineum
Thhalv10028798m.g 1.0kb upstream 1.0kb upstream 2615 true scaffold_3: 242634-245248 Eutrema salsugineum
Thhalv10028798m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 244249-245248 Eutrema salsugineum
Thhalv10028798m.g 1.0kb downstream 1.0kb downstream 2615 true scaffold_3: 241634-244248 Eutrema salsugineum
Thhalv10028798m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 241634-242633 Eutrema salsugineum
Thhalv10028798m.g 2.0kb upstream 2.0kb upstream 3615 true scaffold_3: 242634-246248 Eutrema salsugineum
Thhalv10028798m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 244249-246248 Eutrema salsugineum
Thhalv10028798m.g 2.0kb downstream 2.0kb downstream 3615 true scaffold_3: 240634-244248 Eutrema salsugineum
Thhalv10028798m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 240634-242633 Eutrema salsugineum
Thhalv10028798m.g 5.0kb upstream 5.0kb upstream 6615 true scaffold_3: 242634-249248 Eutrema salsugineum
Thhalv10028798m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 244249-249248 Eutrema salsugineum
Thhalv10028798m.g 5.0kb downstream 5.0kb downstream 6615 true scaffold_3: 237634-244248 Eutrema salsugineum
Thhalv10028798m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 237634-242633 Eutrema salsugineum
Thhalv10028798m.g 10.0kb upstream 10.0kb upstream 11615 true scaffold_3: 242634-254248 Eutrema salsugineum
Thhalv10028798m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 244249-254248 Eutrema salsugineum
Thhalv10028798m.g 10.0kb downstream 10.0kb downstream 11615 true scaffold_3: 232634-244248 Eutrema salsugineum
Thhalv10028798m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 232634-242633 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373265 5261 Brassicaceae View MSA
123833363 5264 Brassicales-Malvales View MSA
124345444 5266 SBM View MSA
124242488 5268 Malvidae View MSA
124068376 5270 Rosid View MSA
123738972 5271 Pentapetalae View MSA
122787583 5272 Eudicot View MSA
122046148 5273 Angiosperm View MSA
121346812 5274 Embryophyte View MSA
123424817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain