Gene : Thhalv10002354m.g E. salsugineum v1.0
Defline:  (1 of 24) 3.1.4.46 - Glycerophosphodiester phosphodiesterase / Glycerophosphoryl diester phosphodiesterase Genomic Order:  3
Name:  ? Thhalv10002354m.g Secondary Identifier:  ? PAC:20196147
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7409 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002354m.g 0.5kb upstream 0.5kb upstream 2598 true scaffold_32: 30120-32717 Eutrema salsugineum
Thhalv10002354m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 30120-30619 Eutrema salsugineum
Thhalv10002354m.g 0.5kb downstream 0.5kb downstream 2598 true scaffold_32: 30620-33217 Eutrema salsugineum
Thhalv10002354m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 32718-33217 Eutrema salsugineum
Thhalv10002354m.g 1.0kb upstream 1.0kb upstream 3098 true scaffold_32: 29620-32717 Eutrema salsugineum
Thhalv10002354m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 29620-30619 Eutrema salsugineum
Thhalv10002354m.g 1.0kb downstream 1.0kb downstream 3098 true scaffold_32: 30620-33717 Eutrema salsugineum
Thhalv10002354m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 32718-33717 Eutrema salsugineum
Thhalv10002354m.g 2.0kb upstream 2.0kb upstream 4098 true scaffold_32: 28620-32717 Eutrema salsugineum
Thhalv10002354m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 28620-30619 Eutrema salsugineum
Thhalv10002354m.g 2.0kb downstream 2.0kb downstream 4098 true scaffold_32: 30620-34717 Eutrema salsugineum
Thhalv10002354m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 32718-34717 Eutrema salsugineum
Thhalv10002354m.g 5.0kb upstream 5.0kb upstream 7098 true scaffold_32: 25620-32717 Eutrema salsugineum
Thhalv10002354m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 25620-30619 Eutrema salsugineum
Thhalv10002354m.g 5.0kb downstream 5.0kb downstream 7098 true scaffold_32: 30620-37717 Eutrema salsugineum
Thhalv10002354m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 32718-37717 Eutrema salsugineum
Thhalv10002354m.g 10.0kb upstream 10.0kb upstream 12098 true scaffold_32: 20620-32717 Eutrema salsugineum
Thhalv10002354m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 20620-30619 Eutrema salsugineum
Thhalv10002354m.g 10.0kb downstream 10.0kb downstream 12098 true scaffold_32: 30620-42717 Eutrema salsugineum
Thhalv10002354m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 32718-42717 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377284 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain