Gene : Thhalv10002419m.g E. salsugineum v1.0
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  372
Name:  ? Thhalv10002419m.g Secondary Identifier:  ? PAC:20196379
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6622 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002419m.g 0.5kb upstream 0.5kb upstream 6279 true scaffold_4: 7697814-7704092 Eutrema salsugineum
Thhalv10002419m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7703593-7704092 Eutrema salsugineum
Thhalv10002419m.g 0.5kb downstream 0.5kb downstream 6279 true scaffold_4: 7697314-7703592 Eutrema salsugineum
Thhalv10002419m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7697314-7697813 Eutrema salsugineum
Thhalv10002419m.g 1.0kb upstream 1.0kb upstream 6779 true scaffold_4: 7697814-7704592 Eutrema salsugineum
Thhalv10002419m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7703593-7704592 Eutrema salsugineum
Thhalv10002419m.g 1.0kb downstream 1.0kb downstream 6779 true scaffold_4: 7696814-7703592 Eutrema salsugineum
Thhalv10002419m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7696814-7697813 Eutrema salsugineum
Thhalv10002419m.g 2.0kb upstream 2.0kb upstream 7779 true scaffold_4: 7697814-7705592 Eutrema salsugineum
Thhalv10002419m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7703593-7705592 Eutrema salsugineum
Thhalv10002419m.g 2.0kb downstream 2.0kb downstream 7779 true scaffold_4: 7695814-7703592 Eutrema salsugineum
Thhalv10002419m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7695814-7697813 Eutrema salsugineum
Thhalv10002419m.g 5.0kb upstream 5.0kb upstream 10779 true scaffold_4: 7697814-7708592 Eutrema salsugineum
Thhalv10002419m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7703593-7708592 Eutrema salsugineum
Thhalv10002419m.g 5.0kb downstream 5.0kb downstream 10779 true scaffold_4: 7692814-7703592 Eutrema salsugineum
Thhalv10002419m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7692814-7697813 Eutrema salsugineum
Thhalv10002419m.g 10.0kb upstream 10.0kb upstream 15779 true scaffold_4: 7697814-7713592 Eutrema salsugineum
Thhalv10002419m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7703593-7713592 Eutrema salsugineum
Thhalv10002419m.g 10.0kb downstream 10.0kb downstream 15779 true scaffold_4: 7687814-7703592 Eutrema salsugineum
Thhalv10002419m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7687814-7697813 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372765 5261 Brassicaceae View MSA
123834953 5264 Brassicales-Malvales View MSA
124346454 5266 SBM View MSA
124243383 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain