Gene : Thhalv10002467m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11659 - GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED Genomic Order:  302
Name:  ? Thhalv10002467m.g Secondary Identifier:  ? PAC:20196355
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5921 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002467m.g 0.5kb upstream 0.5kb upstream 4084 true scaffold_4: 7116914-7120997 Eutrema salsugineum
Thhalv10002467m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7120498-7120997 Eutrema salsugineum
Thhalv10002467m.g 0.5kb downstream 0.5kb downstream 4084 true scaffold_4: 7116414-7120497 Eutrema salsugineum
Thhalv10002467m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7116414-7116913 Eutrema salsugineum
Thhalv10002467m.g 1.0kb upstream 1.0kb upstream 4584 true scaffold_4: 7116914-7121497 Eutrema salsugineum
Thhalv10002467m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7120498-7121497 Eutrema salsugineum
Thhalv10002467m.g 1.0kb downstream 1.0kb downstream 4584 true scaffold_4: 7115914-7120497 Eutrema salsugineum
Thhalv10002467m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7115914-7116913 Eutrema salsugineum
Thhalv10002467m.g 2.0kb upstream 2.0kb upstream 5584 true scaffold_4: 7116914-7122497 Eutrema salsugineum
Thhalv10002467m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7120498-7122497 Eutrema salsugineum
Thhalv10002467m.g 2.0kb downstream 2.0kb downstream 5584 true scaffold_4: 7114914-7120497 Eutrema salsugineum
Thhalv10002467m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7114914-7116913 Eutrema salsugineum
Thhalv10002467m.g 5.0kb upstream 5.0kb upstream 8584 true scaffold_4: 7116914-7125497 Eutrema salsugineum
Thhalv10002467m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7120498-7125497 Eutrema salsugineum
Thhalv10002467m.g 5.0kb downstream 5.0kb downstream 8584 true scaffold_4: 7111914-7120497 Eutrema salsugineum
Thhalv10002467m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7111914-7116913 Eutrema salsugineum
Thhalv10002467m.g 10.0kb upstream 10.0kb upstream 13584 true scaffold_4: 7116914-7130497 Eutrema salsugineum
Thhalv10002467m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7120498-7130497 Eutrema salsugineum
Thhalv10002467m.g 10.0kb downstream 10.0kb downstream 13584 true scaffold_4: 7106914-7120497 Eutrema salsugineum
Thhalv10002467m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7106914-7116913 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372656 5261 Brassicaceae View MSA
123832013 5264 Brassicales-Malvales View MSA
124339604 5266 SBM View MSA
124241399 5268 Malvidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain