Gene : Thhalv10002475m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21266:SF24 - PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC Genomic Order:  608
Name:  ? Thhalv10002475m.g Secondary Identifier:  ? PAC:20196368
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5098 Eutrema salsugineum pathologic  
Esalsugineum PWY-6927 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002475m.g 0.5kb upstream 0.5kb upstream 3036 true scaffold_4: 10979874-10982909 Eutrema salsugineum
Thhalv10002475m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10982410-10982909 Eutrema salsugineum
Thhalv10002475m.g 0.5kb downstream 0.5kb downstream 3036 true scaffold_4: 10979374-10982409 Eutrema salsugineum
Thhalv10002475m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10979374-10979873 Eutrema salsugineum
Thhalv10002475m.g 1.0kb upstream 1.0kb upstream 3536 true scaffold_4: 10979874-10983409 Eutrema salsugineum
Thhalv10002475m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10982410-10983409 Eutrema salsugineum
Thhalv10002475m.g 1.0kb downstream 1.0kb downstream 3536 true scaffold_4: 10978874-10982409 Eutrema salsugineum
Thhalv10002475m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10978874-10979873 Eutrema salsugineum
Thhalv10002475m.g 2.0kb upstream 2.0kb upstream 4536 true scaffold_4: 10979874-10984409 Eutrema salsugineum
Thhalv10002475m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10982410-10984409 Eutrema salsugineum
Thhalv10002475m.g 2.0kb downstream 2.0kb downstream 4536 true scaffold_4: 10977874-10982409 Eutrema salsugineum
Thhalv10002475m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10977874-10979873 Eutrema salsugineum
Thhalv10002475m.g 5.0kb upstream 5.0kb upstream 7536 true scaffold_4: 10979874-10987409 Eutrema salsugineum
Thhalv10002475m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10982410-10987409 Eutrema salsugineum
Thhalv10002475m.g 5.0kb downstream 5.0kb downstream 7536 true scaffold_4: 10974874-10982409 Eutrema salsugineum
Thhalv10002475m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10974874-10979873 Eutrema salsugineum
Thhalv10002475m.g 10.0kb upstream 10.0kb upstream 12536 true scaffold_4: 10979874-10992409 Eutrema salsugineum
Thhalv10002475m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10982410-10992409 Eutrema salsugineum
Thhalv10002475m.g 10.0kb downstream 10.0kb downstream 12536 true scaffold_4: 10969874-10982409 Eutrema salsugineum
Thhalv10002475m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10969874-10979873 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367692 5261 Brassicaceae View MSA
123834068 5264 Brassicales-Malvales View MSA
124342673 5266 SBM View MSA
124241153 5268 Malvidae View MSA
124063848 5270 Rosid View MSA
123748606 5271 Pentapetalae View MSA
122790785 5272 Eudicot View MSA
122042360 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121346632 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain