Gene : Thhalv10029252m.g E. salsugineum v1.0
Defline:  (1 of 2) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  324
Name:  ? Thhalv10029252m.g Secondary Identifier:  ? PAC:20197423
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CHLOROPHYLL-SYN Eutrema salsugineum pathologic  
Esalsugineum HEME-BIOSYNTHESIS-II Eutrema salsugineum pathologic  
Esalsugineum PWY-5918 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10029252m.g 0.5kb upstream 0.5kb upstream 2245 true scaffold_3: 1631903-1634147 Eutrema salsugineum
Thhalv10029252m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1631903-1632402 Eutrema salsugineum
Thhalv10029252m.g 0.5kb downstream 0.5kb downstream 2245 true scaffold_3: 1632403-1634647 Eutrema salsugineum
Thhalv10029252m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1634148-1634647 Eutrema salsugineum
Thhalv10029252m.g 1.0kb upstream 1.0kb upstream 2745 true scaffold_3: 1631403-1634147 Eutrema salsugineum
Thhalv10029252m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1631403-1632402 Eutrema salsugineum
Thhalv10029252m.g 1.0kb downstream 1.0kb downstream 2745 true scaffold_3: 1632403-1635147 Eutrema salsugineum
Thhalv10029252m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1634148-1635147 Eutrema salsugineum
Thhalv10029252m.g 2.0kb upstream 2.0kb upstream 3745 true scaffold_3: 1630403-1634147 Eutrema salsugineum
Thhalv10029252m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1630403-1632402 Eutrema salsugineum
Thhalv10029252m.g 2.0kb downstream 2.0kb downstream 3745 true scaffold_3: 1632403-1636147 Eutrema salsugineum
Thhalv10029252m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1634148-1636147 Eutrema salsugineum
Thhalv10029252m.g 5.0kb upstream 5.0kb upstream 6745 true scaffold_3: 1627403-1634147 Eutrema salsugineum
Thhalv10029252m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1627403-1632402 Eutrema salsugineum
Thhalv10029252m.g 5.0kb downstream 5.0kb downstream 6745 true scaffold_3: 1632403-1639147 Eutrema salsugineum
Thhalv10029252m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1634148-1639147 Eutrema salsugineum
Thhalv10029252m.g 10.0kb upstream 10.0kb upstream 11745 true scaffold_3: 1622403-1634147 Eutrema salsugineum
Thhalv10029252m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1622403-1632402 Eutrema salsugineum
Thhalv10029252m.g 10.0kb downstream 10.0kb downstream 11745 true scaffold_3: 1632403-1644147 Eutrema salsugineum
Thhalv10029252m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1634148-1644147 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028033 5273 Angiosperm View MSA
122358307 5261 Brassicaceae Singleton cluster - no MSA
123796280 5264 Brassicales-Malvales Singleton cluster - no MSA
124294043 5266 SBM Singleton cluster - no MSA
124146624 5268 Malvidae Singleton cluster - no MSA
123872889 5270 Rosid Singleton cluster - no MSA
123457009 5271 Pentapetalae Singleton cluster - no MSA
122492429 5272 Eudicot Singleton cluster - no MSA
121297583 5274 Embryophyte View MSA
123335625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain